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2010-09-06	Robert Buels	the file temp base should work with the configured...	commit \| commitdiff \| tree
2010-09-06	Robert Buels	default www_user is the current user. need to set...	commit \| commitdiff \| tree
2010-09-06	Robert Buels	added GID and group name interpolation capability to...	commit \| commitdiff \| tree
2010-09-06	Robert Buels	added some more informative warnings about gbrowse...	commit \| commitdiff \| tree
2010-09-06	Robert Buels	user id 0 is root. should warn about nonexistent user...	commit \| commitdiff \| tree
2010-09-06	Robert Buels	bugfix to apache deployment, access control was not...	commit \| commitdiff \| tree
2010-09-06	Robert Buels	need to stringify result of path_to if trying to coerce...	commit \| commitdiff \| tree
2010-09-06	Robert Buels	updated Build.PL for new dir layout	commit \| commitdiff \| tree
2010-09-06	Robert Buels	fixed html_optional_show initial collapsing. deleted...	commit \| commitdiff \| tree
2010-09-06	Robert Buels	changed secretom links away from file staging area	commit \| commitdiff \| tree
2010-09-06	Robert Buels	added SOL project logo to SOL-100 page	commit \| commitdiff \| tree
2010-09-05	Robert Buels	added SOL100 introduction text	commit \| commitdiff \| tree
2010-09-05	Robert Buels	typo fix	commit \| commitdiff \| tree
2010-09-05	Robert Buels	add "static" to list of static dirs	commit \| commitdiff \| tree
2010-09-05	Robert Buels	warning squash in clone_info.pl	commit \| commitdiff \| tree
2010-09-05	Robert Buels	make sigpep_find test use SGN::Test::WWW::Mechanize	commit \| commitdiff \| tree
2010-09-05	Robert Buels	fix gem html validation	commit \| commitdiff \| tree
2010-09-05	Robert Buels	fixed markup_string mason test	commit \| commitdiff \| tree
2010-09-05	Robert Buels	tidied up the header of SGN::Test, added ctx_request...	commit \| commitdiff \| tree
2010-09-05	Robert Buels	moved into place and fixed secretom controller tests	commit \| commitdiff \| tree
2010-09-05	Robert Buels	stray debugging diag	commit \| commitdiff \| tree
2010-09-05	Robert Buels	organism controller test too sensitive to sol100 page...	commit \| commitdiff \| tree
2010-09-05	Robert Buels	added missing color highlight to secretary instructions	commit \| commitdiff \| tree
2010-09-05	Robert Buels	run_secretary.pl no longer used	commit \| commitdiff \| tree
2010-09-05	Robert Buels	formatting tweaks to secretary pages, added navbar...	commit \| commitdiff \| tree
2010-09-05	Robert Buels	slightly reduced font size of secretom titles	commit \| commitdiff \| tree
2010-09-05	Robert Buels	more tweaks for IE	commit \| commitdiff \| tree
2010-09-05	Robert Buels	fix secretom transparent links for IE	commit \| commitdiff \| tree
2010-09-05	Robert Buels	est.pl needs to use tempfiles_subdir	commit \| commitdiff \| tree
2010-09-05	Robert Buels	slight tweak to SOL100 wording	commit \| commitdiff \| tree
2010-09-05	Robert Buels	Merge branch 'topic/secretom'	commit \| commitdiff \| tree
2010-09-05	Robert Buels	replaced bare_mason.pl with a bare_mason action in...	commit \| commitdiff \| tree
2010-09-05	Robert Buels	also import toolbar js in the global imports. needed...	commit \| commitdiff \| tree
2010-09-05	Robert Buels	move global JS import from the mason footer into the...	commit \| commitdiff \| tree
2010-09-05	Robert Buels	tweak sol100 wording, per RKL	commit \| commitdiff \| tree
2010-09-05	Robert Buels	add explicit allows for gbrowse CGI configuration,...	commit \| commitdiff \| tree
2010-09-05	Robert Buels	make symlinks for other gbrowse conf contents when...	commit \| commitdiff \| tree
2010-09-05	Robert Buels	additional border-radius for other browsers	commit \| commitdiff \| tree
2010-09-05	Robert Buels	added big button to front of secretom page for secretary	commit \| commitdiff \| tree
2010-09-05	Robert Buels	figure captions back to just bold	commit \| commitdiff \| tree
2010-09-05	Robert Buels	dir creation should succeed even if could not chown...	commit \| commitdiff \| tree
2010-09-05	Robert Buels	organism controller test should pass if no sol100 organisms...	commit \| commitdiff \| tree
2010-09-05	Robert Buels	should die informatively when there is no png for an...	commit \| commitdiff \| tree
2010-09-05	Robert Buels	should die informatively when there is no png for an...	commit \| commitdiff \| tree
2010-09-05	Robert Buels	add a little debug output for throwing 404s	commit \| commitdiff \| tree
2010-09-05	Robert Buels	more fixes for bulk line counting	commit \| commitdiff \| tree
2010-09-05	Robert Buels	bulk display should print header earlier	commit \| commitdiff \| tree
2010-09-05	Robert Buels	ridiculous to use backticks for counting file lines	commit \| commitdiff \| tree
2010-09-05	Robert Buels	band-aided idiotic bulk download file naming	commit \| commitdiff \| tree
2010-09-05	Robert Buels	need globalcontext in bulk download display	commit \| commitdiff \| tree
2010-09-05	Robert Buels	ajax test should pass with different image dirs	commit \| commitdiff \| tree
2010-09-05	Robert Buels	disable SGN::View::Feature gbrowse link test for now...	commit \| commitdiff \| tree
2010-09-04	Robert Buels	figure captions need to be italic	commit \| commitdiff \| tree
2010-09-04	Robert Buels	tweak spinoffs page formatting	commit \| commitdiff \| tree
2010-09-04	Robert Buels	reformatted secretom spinoffs page	commit \| commitdiff \| tree
2010-09-04	Robert Buels	formatted secretom phytophthera interaction page	commit \| commitdiff \| tree
2010-09-04	Robert Buels	reformatted secretom cuticle detail page	commit \| commitdiff \| tree
2010-09-04	Robert Buels	applied rose formatting to secretom profiling detail...	commit \| commitdiff \| tree
2010-09-04	Robert Buels	formatted secretom proteomics page	commit \| commitdiff \| tree
2010-09-04	Robert Buels	applied joss rose formatting to secretom glycoproteome...	commit \| commitdiff \| tree
2010-09-04	Robert Buels	tweak secretom page title and intro styles	commit \| commitdiff \| tree
2010-09-04	Robert Buels	added temporarily unavailable messages to all files...	commit \| commitdiff \| tree
2010-09-04	Robert Buels	applied joss formatting requests to secretom functional_scre...	commit \| commitdiff \| tree
2010-09-04	Robert Buels	updated cell wall links page with missing image and...	commit \| commitdiff \| tree
2010-09-04	Robert Buels	tweak secretary input page styles	commit \| commitdiff \| tree
2010-09-04	Robert Buels	on prediction page, made link to secretary more prominent	commit \| commitdiff \| tree
2010-09-04	Robert Buels	added readme for Paola data	commit \| commitdiff \| tree
2010-09-04	Robert Buels	added missing 12 image	commit \| commitdiff \| tree
2010-09-04	Robert Buels	added missing 11 image	commit \| commitdiff \| tree
2010-09-04	Robert Buels	added missing 5 image	commit \| commitdiff \| tree
2010-09-04	Robert Buels	added missing 4 image	commit \| commitdiff \| tree
2010-09-04	Robert Buels	added missing 3 image	commit \| commitdiff \| tree
2010-09-04	Robert Buels	added missing image to secretom functional page	commit \| commitdiff \| tree
2010-09-04	Robert Buels	formatting tweak	commit \| commitdiff \| tree
2010-09-04	Robert Buels	CXGN::VHost::Test needs to use SGN::Test also for env...	commit \| commitdiff \| tree
2010-09-04	Robert Buels	good idea to set your PERL5LIB in your apache conf...	commit \| commitdiff \| tree
2010-09-04	Robert Buels	fixed sequencer test count	commit \| commitdiff \| tree
2010-09-04	Robert Buels	fixed blastwatch test count	commit \| commitdiff \| tree
2010-09-04	Robert Buels	solpeople test count	commit \| commitdiff \| tree
2010-09-04	Robert Buels	fixed phenome test count	commit \| commitdiff \| tree
2010-09-03	Robert Buels	tweak secretom front page styles	commit \| commitdiff \| tree
2010-09-03	Robert Buels	Merge branch 'master' into topic/secretom	commit \| commitdiff \| tree
2010-09-03	Robert Buels	moved bac detail page validation into the same script...	commit \| commitdiff \| tree
2010-09-03	Robert Buels	make SGN::Test connection counting use the right context...	commit \| commitdiff \| tree
2010-09-03	Robert Buels	01app test needs to use SGN::Test to get its right...	commit \| commitdiff \| tree
2010-09-03	Robert Buels	bugfix to unigene image temp path handling	commit \| commitdiff \| tree
2010-09-03	Robert Buels	make SGN::Test capable of running its validate tests...	commit \| commitdiff \| tree
2010-09-03	Robert Buels	mech should use Class::MOP to try and load classes...	commit \| commitdiff \| tree
2010-09-03	Robert Buels	stubbed out CXGN::VHost::Test to just be Catalyst:...	commit \| commitdiff \| tree
2010-09-01	Robert Buels	added original tomato bath image for future use	commit \| commitdiff \| tree
2010-09-01	Robert Buels	added separate page for all secretom project publications	commit \| commitdiff \| tree
2010-09-01	Robert Buels	removed publications from front secretom page, reformatted...	commit \| commitdiff \| tree
2010-09-01	Robert Buels	secretom page titles are too exposed to align with...	commit \| commitdiff \| tree
2010-09-01	Robert Buels	added POD about when the different test levels are...	commit \| commitdiff \| tree
2010-09-01	Robert Buels	tweak mech logic so that the default level under SGN_TEST_SE...	commit \| commitdiff \| tree
2010-09-01	Robert Buels	delineate test levels in organism controller	commit \| commitdiff \| tree
2010-09-01	Robert Buels	add checking to kill mech if someone tries to get a...	commit \| commitdiff \| tree
2010-09-01	Robert Buels	tweak mech context, use app class if process, use SGN...	commit \| commitdiff \| tree
2010-09-01	Robert Buels	used new test level functions to divide javascript...	commit \| commitdiff \| tree
2010-09-01	Robert Buels	bugfixes to SGN::Test::WWW::Mechanize	commit \| commitdiff \| tree
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