repo.or.cz
/
trakem2.git
/
search
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
log
|
graphiclog1
|
graphiclog2
|
commit
|
commitdiff
|
tree
|
refs
|
edit
|
fork
first
·
prev
·
next
pom-trakem2-1.4.0
2015-09-03
Ste
p
han
S
aalfeld
pom-trakem2-1
.
4
.
0
commit
|
commitdiff
|
tree
2015-09-03
Stephan Saalfeld
a
dded m
u
lti
-
threading
for
c
o
efficient
s
matching
commit
|
commitdiff
|
tree
2015-09-03
St
e
pha
n
Saalfeld
put match inte
n
sities com
m
ands
i
n
t
o
worke
r
s
t
o
block
.
.
.
commit
|
commitdiff
|
tree
2015-09-02
Stephan Saalf
e
ld
Working version without
m
ulti-th
r
eading a
n
d b
u
reaucrats
commit
|
commitdiff
|
tree
2015-09-02
Stephan S
a
alfe
l
d
includ
e
d
match intensities plugin, bu
i
ld with SNAPSHOTS
.
.
.
commit
|
commitdiff
|
tree
2015-08-31
Stepha
n
S
a
alfe
l
d
Merg
e
pull reque
s
t
#
11 from hansl
o
vsky/m
a
st
e
r
commit
|
commitdiff
|
tree
2015-04-07
Stephan Saalf
e
ld
ne
x
t development cycle
commit
|
commitdiff
|
tree
2015-04-07
Stephan Saalfeld
r
e
lea
s
e pom-t
r
ake
m
2
-1
.
3
.
3
commit
|
commitdiff
|
tree
2015-03-26
St
e
phan S
a
alfeld
re-rele
a
s
e pom-trakem2-1
.
3
.
2
commit
|
commitdiff
|
tree
2015-03-24
Stephan S
a
a
l
feld
next development
cycle
commit
|
commitdiff
|
tree
2015-03-24
Step
h
a
n Saalfeld
r
e
-
release pom-trakem
2
-1
.
3
.
2
commit
|
commitdiff
|
tree
2015-03-19
Stephan
S
aalfeld
next develop
m
ent cycle (probl
e
m with Eclipse
K
epler
.
.
.
commit
|
commitdiff
|
tree
2015-03-19
Stephan Saalfeld
release pom-
t
rakem2
-
1
.
3
.
2
commit
|
commitdiff
|
tree
2015-03-07
Stephan Saalfeld
nex
t
development cycle
commit
|
commitdiff
|
tree
2015-03-07
S
tephan Saalfeld
releas
e
commit
|
commitdiff
|
tree
2015-02-14
Stephan Saalfe
l
d
next develo
p
m
e
nt cycle
commit
|
commitdiff
|
tree
2015-02-14
S
tephan
S
a
a
lf
e
ld
release
commit
|
commitdiff
|
tree
2015-02-14
Stephan Saalfeld
r
e
l
e
ase
commit
|
commitdiff
|
tree
2015-01-14
S
te
p
han Saalfeld
adde
d
getters for mls
2
p, q, and w
commit
|
commitdiff
|
tree
2015-01-12
Ste
p
han Saalfeld
Added Eric Trautman's ch
e
ck for num
b
er
of th
r
eads
t
o
.
.
.
commit
|
commitdiff
|
tree
2015-01-12
Stephan Saalfel
d
Fixed Value2No
i
seF
i
lter ma
x
export
commit
|
commitdiff
|
tree
2014-12-19
St
e
phan Saalfeld
bum
p
to
next developm
e
nt cycle
commit
|
commitdiff
|
tree
2014-12-19
Stephan Saalfeld
Merge
remote-tracki
n
g branch '
o
r
i
gin'
commit
|
commitdiff
|
tree
2014-12-19
S
tep
h
an
S
a
alfeld
rep
r
oducible bu
i
l
d
pom-trakem2
-
1
.
1
.
2
commit
|
commitdiff
|
tree
2014-12-19
Steph
a
n Saalfeld
separat
e
d
CoordinateTra
n
sform parts of
le
n
scorrection
.
.
.
commit
|
commitdiff
|
tree
2014-12-18
Stephan Sa
a
lfel
d
ad
d
ed mu
l
tipl
e
le
v
el
downsampling
for ColorProcessor
commit
|
commitdiff
|
tree
2014-12-17
Step
h
a
n Saalfeld
bump to next development cy
c
le
commit
|
commitdiff
|
tree
2014-12-17
S
teph
a
n Saalfeld
second t
r
y to make r
e
p
r
oduc
i
b
l
e
build pom-trakem2
-
1
.
1
.
1
commit
|
commitdiff
|
tree
2014-12-17
Stephan Saalfeld
M
e
rg
e
b
ranc
h
'i
n
tensity-transform'
commit
|
commitdiff
|
tree
2014-12-13
Step
h
an Saalfeld
b
ump to next developme
n
t cy
c
l
e
commit
|
commitdiff
|
tree
2014-12-13
Stephan
S
aalfeld
reproducible buil
d
pom-tra
k
e
m
2
-
1
.
1
.
1
commit
|
commitdiff
|
tree
2014-12-12
Stephan Saalfeld
Mer
g
e
rem
o
te-tracking branch 'origin/ma
s
te
r
'
commit
|
commitdiff
|
tree
2014-12-12
Stephan
Saalfeld
bump to new d
e
velopment
cycle
commit
|
commitdiff
|
tree
2014-12-12
S
t
e
phan
S
aalfeld
reproduc
i
ble
bu
i
ld pom
-
trakem2-1
.
1
.
0
commit
|
commitdiff
|
tree
2014-12-12
S
tephan Saalfeld
Merge bran
c
h 'master' of github
.
c
om:trakem2/
T
rakEM2
commit
|
commitdiff
|
tree
2014-12-12
Stephan Sa
a
lfeld
a
dded ValueTo
N
oise
filter w
h
ich f
i
lls a given int
e
nsity
.
.
.
commit
|
commitdiff
|
tree
2014-11-12
Stephan
Sa
a
l
f
eld
Update REA
D
ME
commit
|
commitdiff
|
tree
2014-11-12
St
e
ph
a
n Saalfeld
Update README
commit
|
commitdiff
|
tree
2014-11-07
S
t
ephan Saalfe
l
d
M
erge branch
'master' into coord
X
fmFix
commit
|
commitdiff
|
tree
2014-11-07
Ste
p
han Sa
a
l
f
e
l
d
Merge remote-tracking bra
n
ch 'origin/int
e
nsity
-
transfor
m
'
commit
|
commitdiff
|
tree
2014-10-04
St
e
phan Saalfel
d
added Ro
b
ustNorm
a
lizedL
o
calContr
a
s
t
Fil
t
er, fast and
.
.
.
commit
|
commitdiff
|
tree
2014-10-04
Stepha
n
Saalfel
d
Changed default block radius
i
n Normaliz
e
LocalC
o
ntr
a
st
.
.
.
commit
|
commitdiff
|
tree
2014-10-02
S
tephan Saal
f
eld
auto-removed some training whitespaces
commit
|
commitdiff
|
tree
2014-10-02
Stephan Saal
f
eld
added
ru
n
meth
o
d t
h
at
d
oes not n
e
ed a worker fo
r
easier
.
.
.
commit
|
commitdiff
|
tree
2014-10-02
St
e
phan Saalfel
d
auto-r
e
moved some
tr
a
iling w
h
i
tespaces
commit
|
commitdiff
|
tree
2014-10-02
Ste
p
han
S
aalfe
l
d
parallelized intersec
t
ion tests for pa
i
r
OverlappingT
i
les
commit
|
commitdiff
|
tree
2014-10-02
Step
h
an Saalfeld
auto-fin
a
lize constant prope
r
ties and para
m
eters in
.
.
.
commit
|
commitdiff
|
tree
2014-10-02
St
e
phan S
a
alfel
d
thre
a
dsafe Utils
.
ensure(File)
commit
|
commitdiff
|
tree
2014-06-06
Stephan Saalfeld
fi
x
ed
bug
i
n g
e
ne
r
ation of alpham
a
s
k
s
commit
|
commitdiff
|
tree
2014-06-05
Ste
p
han Saalf
e
ld
externalized Dis
t
ortionCor
r
ection
.
ru
n
to enable
calling
.
.
.
commit
|
commitdiff
|
tree
2014-06-05
Stephan
Saalfe
l
d
Eclipse
a
utu-cosmetics in DistortionCorrection
commit
|
commitdiff
|
tree
2014-05-19
Ste
p
han
Saa
l
feld
Merge branch 'master' in
t
o intensity-
t
ra
n
sform
commit
|
commitdiff
|
tree
2014-05-19
Stephan S
a
al
f
eld
use standard
w
riter for coordinatet
r
a
n
sforms
commit
|
commitdiff
|
tree
2014-05-19
St
e
phan Saalfe
l
d
depend on javax
.
media f
o
r jai
commit
|
commitdiff
|
tree
2014-05-19
Ste
p
han Saal
f
e
l
d
added methods for downsampling more than one level
commit
|
commitdiff
|
tree
2013-10-10
Ste
p
han
Saalfeld
r
e
placed plu
g
ins
.
conf
i
g with the F
i
ji version
commit
|
commitdiff
|
tree
2013-09-20
Stephan Saalfeld
Merge branch 'maste
r
' of
s
sh://repo
.
or
.
c
z
/srv/git/
t
rakem2
commit
|
commitdiff
|
tree
2013-09-19
Stephan Saalf
e
ld
Merge branch
'
mast
e
r' of ssh://repo
.
or
.
cz/srv/git/trak
e
m
2
commit
|
commitdiff
|
tree
2013-09-19
Stephan Saalfeld
Parallel pairOverlappingTi
l
es did not work
a
nd r
e
p
orte
d
.
.
.
commit
|
commitdiff
|
tree
2013-09-16
S
tephan Saalfeld
Merge bran
c
h 'master' of ssh://
r
epo
.
or
.
cz/srv/git/trakem2
commit
|
commitdiff
|
tree
2013-09-16
Stephan Saalf
e
ld
re-added
l
egacy
optimizer for spring meshes, this would
.
.
.
commit
|
commitdiff
|
tree
2013-09-16
Stephan Saalfel
d
T2
-
NIT/
p
om
.
xml can inh
e
ri
t
v
er
s
ion number from paren
t
commit
|
commitdiff
|
tree
2013-08-14
Stephan Saalfeld
added missin
g
de
p
endenci
e
s
t
o
ja
v
a3d core-uti
l
s and
.
.
.
commit
|
commitdiff
|
tree
2013-08-14
Stephan Saalfeld
set pare
n
t
pom
o
f
pom-trakem2 to p
o
m-fiji
.
2
.
0
.
0
-
SNAP
S
HOT
commit
|
commitdiff
|
tree
2013-08-12
S
t
ephan Saalf
e
ld
Merge b
r
a
n
ch 'sp
r
in
g
-
mes
h
2' of ssh://repo
.
or
.
cz/srv
.
.
.
commit
|
commitdiff
|
tree
2013-08-12
Stephan Saalfeld
Mer
g
e branch '
m
aster'
i
nto
s
p
r
ing-mesh
2
commit
|
commitdiff
|
tree
2013-08-12
Stepha
n
Saa
l
f
el
d
rai
s
ed mpicbg depen
d
e
ncy version to 0
.
6
.
1
-
SNA
P
SHOT
commit
|
commitdiff
|
tree
2013-08-12
S
t
eph
a
n S
a
alfe
l
d
raise
d
d
e
pendency
to Simple_Ne
u
rite_Tracer to 2
.
0
.
2
commit
|
commitdiff
|
tree
2013-08-12
S
t
e
p
han
Sa
a
lfel
d
Merge b
r
anch '
m
a
s
ter'
i
nto spring-
m
esh2
commit
|
commitdiff
|
tree
2013-08-12
Stephan
Saalfeld
added comments and auto-fi
n
a
l
ize
i
n
D
is
t
ort
i
o
n
Correct
i
on
/
N
L
T
commit
|
commitdiff
|
tree
2013-08-12
Stephan Saalf
e
ld
added mpicbg
.
version as maven
p
roperty,
commit
|
commitdiff
|
tree
2013-05-06
Stephan Saalfeld
track
m
ove of the imglib1 depen
d
e
n
cy
commit
|
commitdiff
|
tree
2013-04-22
Stephan
Saalfeld
Merge branch
'master' i
n
to s
p
ring-mesh2
commit
|
commitdiff
|
tree
2013-03-05
Ste
p
han
S
aalfeld
M
e
r
ge
b
ranch 'master
'
in
t
o spring-mesh2
commit
|
commitdiff
|
tree
2013-01-18
St
e
phan Saalfeld
use
array
l
i
s
t wher
e
arraylist
s
a
re returned
commit
|
commitdiff
|
tree
2013-01-16
Step
h
a
n
Saa
l
feld
adjust
m
p
icb
g
spring-mesh2 wh
i
ch needs le
s
s damping
commit
|
commitdiff
|
tree
2013-01-11
Step
h
an Saalfeld
Fixed bug i
n
Patch
.
ge
t
FullCoordinateTransform that
.
.
.
commit
|
commitdiff
|
tree
2013-01-11
Stephan S
a
alfeld
Changed f
i
xedPa
t
c
hes/T
i
le
s
i
nput co
l
lec
t
i
on to Set
.
.
.
commit
|
commitdiff
|
tree
2013-01-11
Stepha
n
Saalf
e
ld
Pa
i
r constructo
r
has
to be publ
i
c
commit
|
commitdiff
|
tree
2013-01-10
Stephan Saalfeld
forgot to set isAligned
flag in elastic layer
a
lignment
.
.
.
commit
|
commitdiff
|
tree
2013-01-09
Stepha
n
Saalfeld
elas
t
ic m
o
ntage p
a
ram
m
ust be public
commit
|
commitdiff
|
tree
2013-01-07
Step
h
an Saalfeld
added
P
a
t
c
h
.
g
e
tFullCor
d
inateTr
a
nsform() which genera
t
es
a
commit
|
commitdiff
|
tree
2013-01-07
S
t
ephan Saalfeld
*
remo
v
ed isAl
i
gned f
r
om Abs
t
ract P
a
ram class
commit
|
commitdiff
|
tree
2013-01-05
S
t
ephan Sa
a
lfeld
877: it is legal
fo
r
layerThing to be null
commit
|
commitdiff
|
tree
2012-12-21
S
t
ephan Saal
f
eld
Cor
r
ected several long-standing issues
with
S
IFT-
l
inear and
commit
|
commitdiff
|
tree
2012-12-19
St
e
phan
S
a
alfe
l
d
Regula
r
ized
L
ay
e
rA
l
i
g
nment got
mo
r
e fl
e
xible API met
h
ods and
commit
|
commitdiff
|
tree
2012-12-19
St
e
ph
a
n Saa
l
feld
cle
a
r
ing cache in
layer alignm
e
nt must be
d
efault true
commit
|
commitdiff
|
tree
2012-12-19
Stephan S
a
alfeld
print optimiz
e
r r
e
sults and do not
p
r
in
t
"matching
.
.
.
commit
|
commitdiff
|
tree
2012-12-19
Stepha
n
Saa
l
feld
d
o no
t
remo
v
e
emp
t
y
layers in layer alignment
commit
|
commitdiff
|
tree
2012-11-07
Stephan Saalfel
d
f
ixed version
number o
f
mpicbg
d
ep
e
ndency
commit
|
commitdiff
|
tree
2012-11-07
Stephan Saalf
e
ld
fixed merge error:
moved Ro
b
ustN
o
rmalizeLocalCont
r
ast
.
.
.
commit
|
commitdiff
|
tree
2012-09-01
Stepha
n
Saalfeld
multi-threaded Robu
s
tNormaliz
e
LocalContrast main body
commit
|
commitdiff
|
tree
2012-09-01
S
tephan Saalfeld
R
e
m
oved D
i
splay
C
anvas
.
setDrawin
g
C
olor(int,int
,
boolean
.
.
.
commit
|
commitdiff
|
tree
2012-08-31
St
e
phan Saalfe
l
d
Mer
g
e bra
n
ch 'ma
s
ter' of ssh:
/
/repo
.
or
.
cz/srv/git/trakem2
commit
|
commitdiff
|
tree
2012-08-31
St
e
phan
S
a
al
f
el
d
add
e
d ex
p
erimental local contrast
e
nhancer Robu
s
tNormalizeLo
.
.
.
commit
|
commitdiff
|
tree
2012-06-29
Ste
p
ha
n
Saa
l
feld
removed obsolete c
h
o
i
c
e from
a
lign la
y
ers
dialog
commit
|
commitdiff
|
tree
2012-06-26
Stephan Saalfeld
split elastic montage dialog fo
r
bloc
k
matching
a
nd
u
se
commit
|
commitdiff
|
tree
2012-06-26
S
tep
h
an Saalfeld
Merge branch 'master
'
of ssh:
/
/rep
o
.
or
.
cz/srv/git/t
r
akem2
commit
|
commitdiff
|
tree
2012-06-26
Stephan Saa
l
feld
u
se and
d
o
not ignore alpha in
h
el
p
e
r method
commit
|
commitdiff
|
tree
2012-06-21
S
tephan
Saa
l
feld
use the ne
w
sequential
dialog
s
in "montage" fo
r
a
select
i
o
n
.
.
.
commit
|
commitdiff
|
tree
next