mason/qtl/population/stat_tools.mas

   1 <%doc>
   2
   3 =head1 NAME
   4 qtl/population/stat_tools.mas - a mason component for the interactive qtl analysis interface
   5
   6 =AUTHOR
   7 Isaak Y Tecle (iyt2@cornell.edu)
   8
   9 =cut
  10
  11 </%doc>
  12
  13 <%args>
  14
  15 $pop_id
  16 $referer
  17 $guideline
  18 $userid
  19
  20 </%args>
  21
  22 <& /util/import_javascript.mas, classes => [ "CXGN.Phenome.Qtl" ] &>
  23
  24 <div id="statTools">
  25   <form>
  26     <table>
  27       <tr>
  28         <td>
  29           <input type="radio"
  30                  onclick="Qtl.toggleStatOptions('default');Qtl.setUserStatOption(<% $pop_id %>, 'default')"
  31                  name="stat_options"
  32                  value="default qtl parameters"> Use default QTL parameters
  33         </td>
  34         <td>
  35           <input type="radio"
  36                  onclick="Qtl.setUserStatOption(<% $pop_id %>, 'user_params');Qtl.logUser(<% $userid %>)"
  37                  name="stat_options"
  38                  value="user qtl parameters"> Set your own QTL analysis parameters
  39         </td>
  40 % if (0)
  41 %{
  42        <td>
  43           <input type="radio"
  44                  onclick="Qtl.toggleStatOptions('diagnosticTests')"
  45                  name="stat_options"
  46                  value="diagnostic tests"> Diagnostic tests
  47      </td>
  48 %}
  49       </tr>
  50     </table>
  51   </form>
  52
  53   <div id="default"  style="display:none; color:blue">
  54        Please proceed with your QTL analysis of your trait of interest.<br />
  55        The default parameters for QTL analysis are <br />
  56        displayed on the legend of the analysis output.<br />
  57   </div>
  58   <div id="qtlParameters" style="display:none">
  59     <table align="center">
  60      <tr>
  61        <td>
  62           <% $guideline %>
  63         </td>
  64       </tr>
  65     </table>
  66
  67     <& /qtl/qtl_form/stat_form.mas,
  68      pop_id  => $pop_id,
  69      referer => $referer,
  70      guide   => $guideline
  71   &>
  72  </div>
  73
  74 % if (0)
  75 %{
  76   <div id="diagnosticTests"
  77        style="display:none;
  78               color:blue;
  79               text-align:right
  80               ">
  81     Under development.
  82   </div>
  83 %}
  84 </div>
  85
  86  <& /qtl/waitmessage.mas &>