sgn_fixture_template.conf

   1
   2 # this file should not contain database access info.
   3 # the key/value pairs in here will be used for the sgn_fixture.conf file
   4 # to run fixture-based tests.
   5 #
   6
   7 homepage_files_dir        t/data/static_content
   8
   9 main_production_site_url  http://localhost:3010
  10 cache_file_path /tmp
  11 trait_ontology_db_name CO
  12 allow_observation_variable_submission_interface 1
  13
  14 default_genotyping_protocol "GBS ApeKI genotyping v4"
  15 #disable_login 0
  16
  17 vigs_db_path             __HOME__/t/data/vigstool/
  18 vigs_default_db          Nicotiana_benthamiana_v0.4.4
  19
  20 blast_path                ""
  21 blast_db_path             __HOME__/t/data/blast
  22 blast_log                 /tmp/blast.log
  23 trial_download_logfile /tmp/trial_download_log
  24
  25 cluster_shared_bindir  /usr/bin
  26 #
  27 #the shared temp directory used by cluster nodes
  28 cluster_shared_tempdir     /tmp
  29 gbs_temp_data  /tmp
  30
  31
  32 archive_path /tmp/archive_test
  33 static_datasets_path      /export/prod/tmp
  34 image_dir                 /images/image_files
  35
  36 production_server 0
  37
  38 solgs_dir /tmp/solgs/__USERNAME__
  39
  40 <Controller::Cview>
  41 cview_default_map_id 1
  42 </Controller::Cview>
  43
  44 #solyc_conversion_files
  45 cview_db_backend Cassava
  46