5 $editable_stock_props => {}
6 $editable_stock_props_definitions => {}
9 $management_factor_types => ()
14 <& /util/import_javascript.mas, classes => [ 'CXGN.GuidedHelp','bootstrap_min.js', 'jquery.iframe-post-form', 'CXGN.List', 'CXGN.BreedersToolbox.AddTrial','CXGN.BreedersToolbox.UploadTrial','CXGN.BreedersToolbox.Trial', 'CXGN.Trial','CXGN.BreedersToolbox.GenotypingTrial','CXGN.BreedersToolbox.Accessions', 'CXGN.BreedersToolbox.UploadPedigrees','CXGN.BreedersToolbox.Crosses','CXGN.BreedersToolbox.FieldBook','CXGN.BreedersToolbox.UploadPhenotype', 'CXGN.BreederSearch', 'CXGN.Trial','CXGN.TrialTreeFolders' ] &>
16 <div class="panel panel-default">
17 <div class="panel-body">
18 <& /page/page_title.mas, title=>"New to the database?" &>
21 <button class="btn btn-primary btn-block" id="guided_help_begin_button">Let us help!<br/>Click this button to begin our guided help.</button>
26 <div class="modal fade" id="guided_help_begin_dialog" name="guided_help_begin_dialog" tabindex="-1" role="dialog" aria-labelledby="guidedHelpBeginDialog">
27 <div class="modal-dialog modal-xl" role="document">
28 <div class="modal-content">
29 <div class="modal-header" style="text-align: center">
30 <button type="button" class="close" data-dismiss="modal" aria-label="Close"><span aria-hidden="true">×</span></button>
31 <h4 class="modal-title" id="guidedHelpBeginDialog">What are you interested in? <a href="https://solgenomics.github.io/sgn">For General Help</a></h4>
33 <div class="modal-body">
34 <div class="container-fluid">
36 <div class="col-sm-6">
39 <div class="col-sm-3">
40 <span style="font-size:2.5em;" class="glyphicon glyphicon-cloud-upload"></span>
42 <div class="col-sm-7">
43 <h4>Upload an experimental field trial into the database that you have saved on your computer in Excel</h4>
45 <div class="col-sm-2">
46 <button name="upload_trial_link" class="btn btn-primary btn-sm">Go</button>
51 <div class="col-sm-6">
54 <div class="col-sm-3">
55 <span style="font-size:2.5em;" class="glyphicon glyphicon glyphicon-flash"></span>
57 <div class="col-sm-7">
58 <h4>Design a completely new experimental field trial in the database</h4>
60 <div class="col-sm-2">
61 <button id="add_project_link" class="btn btn-primary btn-sm">Go</button>
68 <div class="col-sm-6">
71 <div class="col-sm-3">
72 <span style="font-size:2.5em;" class="glyphicon glyphicon-list-alt"></span>
74 <div class="col-sm-7">
75 <h4>Catalog your available seed inventory into the database</h4>
77 <div class="col-sm-2">
78 <button id="guided_help_seedlot_inventory_button" class="btn btn-primary btn-sm">Go</button>
83 <div class="col-sm-6">
86 <div class="col-sm-3">
87 <span style="font-size:2.5em;" class="glyphicon glyphicon-book"></span>
89 <div class="col-sm-7">
90 <h4>Upload phenotypic data into the database that you have saved on your computer in Excel</h4>
92 <div class="col-sm-2">
93 <button id="guided_help_upload_phenotypes_button" class="btn btn-primary btn-sm">Go</button>
100 <div class="col-sm-6">
103 <div class="col-sm-3">
104 <span style="font-size:2.5em;" class="glyphicon glyphicon-flag"></span>
106 <div class="col-sm-7">
107 <h4>Plan tissue sampling</h4>
109 <div class="col-sm-2">
110 <button name="tissue_sample_guided_help" class="btn btn-primary btn-sm">Go</button>
115 <div class="col-sm-6">
118 <div class="col-sm-3">
119 <span style="font-size:2.5em;" class="glyphicon glyphicon-random"></span>
121 <div class="col-sm-7">
122 <h4>Upload crosses and crossing information into the database</h4>
124 <div class="col-sm-2">
125 <button name="upload_crosses_link" class="btn btn-primary btn-sm">Go</button>
132 <div class="col-sm-6">
135 <div class="col-sm-3">
136 <span style="font-size:2.5em;" class="glyphicon glyphicon-tags"></span>
138 <div class="col-sm-7">
139 <h4>Print barcode labels for my experiment (for your plots or plants or tissue samples in the field, or for your 96 well plate and tissue samples)</h4>
141 <div class="col-sm-2">
142 <button id="guided_help_barcode_trial_button" class="btn btn-primary btn-sm">Go</button>
147 <div class="col-sm-6">
150 <div class="col-sm-3">
151 <span style="font-size:2.5em;" class="glyphicon glyphicon-blackboard"></span>
153 <div class="col-sm-7">
154 <h4>Analyze phenotypic performance across trials</h4>
156 <div class="col-sm-2">
157 <button id="guided_help_trial_comparison_button" class="btn btn-primary btn-sm">Go</button>
164 <div class="col-sm-6">
167 <div class="col-sm-3">
168 <span style="font-size:2.5em;" class="glyphicon glyphicon-th"></span>
170 <div class="col-sm-7">
171 <h4>Prepare a 96 or 384 well plate for a genotyping experiment</h4>
173 <div class="col-sm-2">
174 <button name="create_genotyping_trial_link" class="btn btn-primary btn-sm">Go</button>
179 <div class="col-sm-6">
182 <div class="col-sm-3">
183 <span style="font-size:2.5em;" class="glyphicon glyphicon-map-marker"></span>
185 <div class="col-sm-7">
186 <h4>Upload VCF genotypic data</h4>
188 <div class="col-sm-2">
189 <button name="upload_genotyping_data_link" class="btn btn-primary btn-sm">Go</button>
197 <div class="modal-footer">
198 <button id="close_guided_help_begin_dialog" type="button" class="btn btn-default" data-dismiss="modal">Close</button>
204 <& /help/workflow_guided/tissue_sample_help.mas &>
206 <& /help/workflow_guided/seedlot_inventory_modal.mas, timestamp=>$timestamp &>
207 <& /help/workflow_guided/phenotype_upload_modal.mas &>
208 <& /help/workflow_guided/trial_barcoding_modal.mas &>
209 <& /help/workflow_guided/trial_comparison_modal.mas &>
211 <& /breeders_toolbox/trial/trial_upload_dialogs.mas, breeding_programs=>$breeding_programs, locations=>$locations, design_types => $design_types &>
212 <& /breeders_toolbox/trial/trial_create_dialogs.mas, locations => $locations, breeding_programs => $breeding_programs, management_factor_types => $management_factor_types, design_types => $design_types &>
214 <& /breeders_toolbox/genotyping_trials/upload_genotyping_data_dialogs.mas, facilities=>$facilities &>
215 <& /breeders_toolbox/genotyping_trials/create_genotyping_trial_dialogs.mas, facilities=>$facilities &>
217 <& /breeders_toolbox/upload_seedlots_inventory_dialogs.mas &>
218 <& /breeders_toolbox/upload_seedlots_dialogs.mas &>
219 <& /breeders_toolbox/add_seedlot_dialogs.mas, timestamp=>$timestamp &>
220 <& /breeders_toolbox/add_accessions_dialogs.mas, preferred_species=>$preferred_species, editable_stock_props=>$editable_stock_props, editable_stock_props_definitions=>$editable_stock_props_definitions &>
221 <& /breeders_toolbox/cross/upload_crosses_dialogs.mas, programs=>$breeding_programs, locations=>$locations &>
222 <& /breeders_toolbox/cross/add_cross_dialogs.mas, programs=>$breeding_programs, locations=>$locations &>
223 <& /breeders_toolbox/cross/add_crossing_trial_dialogs.mas, programs=>$breeding_programs, locations=>$locations &>