db/00028/AddFilesExperimentLinkingTable.pm

   1 #!/usr/bin/env perl
   2
   3
   4 =head1 NAME
   5
   6  AddFilesExperimentLinkingTable.pm
   7
   8 =head1 SYNOPSIS
   9
  10 mx-run ThisPackageName [options] -H hostname -D dbname -u username [-F]
  11
  12 this is a subclass of L<CXGN::Metadata::Dbpatch>
  13 see the perldoc of parent class for more details.
  14
  15 =head1 DESCRIPTION
  16
  17 This subclass uses L<Moose>. The parent class uses L<MooseX::Runnable>
  18
  19 =head1 AUTHOR
  20
  21  Jeremy Edwards <jde22@cornell.edu>
  22  Naama Menda<nm249@cornell.edu>
  23  Lukas Mueller <lam87@cornell.edu>
  24
  25 =head1 COPYRIGHT & LICENSE
  26
  27 Copyright 2010 Boyce Thompson Institute for Plant Research
  28
  29 This program is free software; you can redistribute it and/or modify
  30 it under the same terms as Perl itself.
  31
  32 =cut
  33
  34
  35 package AddFilesExperimentLinkingTable;
  36
  37 use Moose;
  38 extends 'CXGN::Metadata::Dbpatch';
  39
  40
  41 has '+description' => ( default => <<'' );
  42 Adds the linking table between files and experiments to Phenome
  43
  44 has '+prereq' => (
  45     default => sub {
  46         [],
  47     },
  48   );
  49
  50 sub patch {
  51     my $self=shift;
  52
  53     print STDOUT "Executing the patch:\n " .   $self->name . ".\n\nDescription:\n  ".  $self->description . ".\n\nExecuted by:\n " .  $self->username . " .";
  54
  55     print STDOUT "\nChecking if this db_patch was executed before or if previous db_patches have been executed.\n";
  56
  57     print STDOUT "\nExecuting the SQL commands.\n";
  58
  59     $self->dbh->do(<<EOSQL);
  60 --do your SQL here
  61 --
  62
  63 CREATE TABLE phenome.nd_experiment_md_files (nd_experiment_md_files_id serial primary key, nd_experiment_id bigint REFERENCES nd_experiment, file_id bigint REFERENCES metadata.md_files);
  64
  65 EOSQL
  66
  67 print "You're done!\n";
  68 }
  69
  70
  71 ####
  72 1; #
  73 ####