db/00023/AddUniqueBarcodeSeq.pm

   1 #!/usr/bin/env perl
   2
   3
   4 =head1 NAME
   5
   6  SampleDbpatchMoose.pm
   7
   8 =head1 SYNOPSIS
   9
  10 mx-run AddUniqueBarcodeSeq [options] -H hostname -D dbname -u username [-F]
  11
  12 this is a subclass of L<CXGN::Metadata::Dbpatch>
  13 see the perldoc of parent class for more details.
  14
  15 =head1 DESCRIPTION
  16
  17 Adds a sequence to the phenome schema to keep track of the unique barcode label feature.
  18
  19 This subclass uses L<Moose>. The parent class uses L<MooseX::Runnable>
  20
  21 =head1 AUTHOR
  22
  23  Lukas Mueller <lam87@cornell.edu>
  24  Naama Menda<nm249@cornell.edu>
  25
  26 =head1 COPYRIGHT & LICENSE
  27
  28 Copyright 2010 Boyce Thompson Institute for Plant Research
  29
  30 This program is free software; you can redistribute it and/or modify
  31 it under the same terms as Perl itself.
  32
  33 =cut
  34
  35
  36 package TestDbpatchMoose;
  37
  38 use Moose;
  39 extends 'CXGN::Metadata::Dbpatch';
  40
  41
  42 has '+description' => ( default => <<'' );
  43 Description of this patch goes here
  44
  45 has '+prereq' => (
  46     default => sub {
  47         ['MyPrevPatch'],
  48     },
  49   );
  50
  51 sub patch {
  52     my $self=shift;
  53
  54     print STDOUT "Executing the patch:\n " .   $self->name . ".\n\nDescription:\n  ".  $self->description . ".\n\nExecuted by:\n " .  $self->username . " .";
  55
  56     print STDOUT "\nChecking if this db_patch was executed before or if previous db_patches have been executed.\n";
  57
  58     print STDOUT "\nExecuting the SQL commands.\n";
  59
  60     $self->dbh->do(<<EOSQL);
  61 --do your SQL here
  62 --
  63
  64 CREATE SEQUENCE phenome.unique_barcode_label_id_seq;
  65
  66 GRANT usage on phenome.unique_barcode_label_id_seq to web_usr;
  67
  68 EOSQL
  69
  70 print "You're done!\n";
  71 }
  72
  73
  74 ####
  75 1; #
  76 ####