mason/solgs/model/pca.mas

   1 <%doc>
   2
   3 =head1 NAME
   4 /solgs/model/pca.mas - displays population structure analysis(PCA) output
   5
   6 =AUTHOR
   7 Isaak Y Tecle (iyt2@cornell.edu)
   8
   9 =cut
  10
  11 </%doc>
  12
  13 <%args>
  14
  15 $trial_id => ''
  16
  17 </%args>
  18
  19 <%perl>
  20
  21 my $pop_id = $trial_id if $trial_id;
  22
  23 </%perl>
  24
  25
  26 <style>
  27
  28 .axis path, .axis line {
  29   fill: none;
  30   stroke: #000;
  31   shape-rendering: crispEdges;
  32 }
  33
  34 </style>
  35 <link rel="stylesheet" href="/static/css/solgs/solgs.css" type="text/css" />
  36 <& /util/import_javascript.mas, classes => ["solGS.pca"] &>
  37
  38 <&| /page/info_section.mas,
  39   collapsible => 1,
  40   collapsed   => 0,
  41   title       => "Population structure analysis - PCA"
  42 &>
  43
  44 <input id="run_pca" class="button" type="button" value="Run PCA" />
  45 <div id="pca_canvas"></div>
  46 <div id="pca_plot"></div>
  47 <div id="pca_message" style="font-weight:bold;text-align:center;color:#A7C942"></div>
  48 <input type="hidden" id="population_id" value="<% $pop_id %>" />
  49
  50 </&>
  51
  52
  53
  54