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79 <li class=
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"index.html"><a href=
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80 <li class=
"chapter" data-level=
"1" data-path=
"basic-website-usage.html"><a href=
"basic-website-usage.html"><i class=
"fa fa-check"></i><b>1</b> Basic Website Usage
</a>
82 <li class=
"chapter" data-level=
"1.1" data-path=
"basic-website-usage.html"><a href=
"basic-website-usage.html#creating-a-user-account"><i class=
"fa fa-check"></i><b>1.1</b> Creating a User Account
</a>
84 <li class=
"chapter" data-level=
"1.1.1" data-path=
"basic-website-usage.html"><a href=
"basic-website-usage.html#verifying-first-that-you-do-not-already-have-an-account"><i class=
"fa fa-check"></i><b>1.1.1</b> Verifying first that you do not already have an account
</a></li>
85 <li class=
"chapter" data-level=
"1.1.2" data-path=
"basic-website-usage.html"><a href=
"basic-website-usage.html#creating-a-user-account-1"><i class=
"fa fa-check"></i><b>1.1.2</b> Creating a user account
</a></li>
87 <li class=
"chapter" data-level=
"1.2" data-path=
"basic-website-usage.html"><a href=
"basic-website-usage.html#managing-your-account"><i class=
"fa fa-check"></i><b>1.2</b> Managing your Account
</a>
89 <li class=
"chapter" data-level=
"1.2.1" data-path=
"basic-website-usage.html"><a href=
"basic-website-usage.html#login"><i class=
"fa fa-check"></i><b>1.2.1</b> Login
</a></li>
90 <li class=
"chapter" data-level=
"1.2.2" data-path=
"basic-website-usage.html"><a href=
"basic-website-usage.html#editing-account-settings"><i class=
"fa fa-check"></i><b>1.2.2</b> Editing Account Settings
</a></li>
91 <li class=
"chapter" data-level=
"1.2.3" data-path=
"basic-website-usage.html"><a href=
"basic-website-usage.html#changing-your-account-status-from-user-to-submitter"><i class=
"fa fa-check"></i><b>1.2.3</b> Changing Your Account Status: From “User” to “Submitter”
</a></li>
92 <li class=
"chapter" data-level=
"1.2.4" data-path=
"basic-website-usage.html"><a href=
"basic-website-usage.html#submitting-feedback-on-an-sgn-database"><i class=
"fa fa-check"></i><b>1.2.4</b> Submitting Feedback on an SGN Database
</a></li>
94 <li class=
"chapter" data-level=
"1.3" data-path=
"basic-website-usage.html"><a href=
"basic-website-usage.html#menu-layout"><i class=
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</a>
96 <li class=
"chapter" data-level=
"1.3.1" data-path=
"basic-website-usage.html"><a href=
"basic-website-usage.html#menu-options"><i class=
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</a></li>
98 <li class=
"chapter" data-level=
"1.4" data-path=
"basic-website-usage.html"><a href=
"basic-website-usage.html#working-with-lists"><i class=
"fa fa-check"></i><b>1.4</b> Working with Lists
</a>
100 <li class=
"chapter" data-level=
"1.4.1" data-path=
"basic-website-usage.html"><a href=
"basic-website-usage.html#creating-lists"><i class=
"fa fa-check"></i><b>1.4.1</b> Creating lists
</a></li>
101 <li class=
"chapter" data-level=
"1.4.2" data-path=
"basic-website-usage.html"><a href=
"basic-website-usage.html#viewing-and-editing-lists"><i class=
"fa fa-check"></i><b>1.4.2</b> Viewing and editing lists
</a></li>
103 <li class=
"chapter" data-level=
"1.5" data-path=
"basic-website-usage.html"><a href=
"basic-website-usage.html#user-permissions"><i class=
"fa fa-check"></i><b>1.5</b> User Permissions
</a></li>
105 <li class=
"chapter" data-level=
"2" data-path=
"searching-the-database.html"><a href=
"searching-the-database.html"><i class=
"fa fa-check"></i><b>2</b> Searching the Database
</a>
107 <li class=
"chapter" data-level=
"2.1" data-path=
"searching-the-database.html"><a href=
"searching-the-database.html#search-wizard"><i class=
"fa fa-check"></i><b>2.1</b> The Search Wizard
</a>
109 <li class=
"chapter" data-level=
"2.1.1" data-path=
"searching-the-database.html"><a href=
"searching-the-database.html#how-the-search-wizard-works"><i class=
"fa fa-check"></i><b>2.1.1</b> How the Search Wizard Works
</a></li>
110 <li class=
"chapter" data-level=
"2.1.2" data-path=
"searching-the-database.html"><a href=
"searching-the-database.html#how-to-use-retrieved-data"><i class=
"fa fa-check"></i><b>2.1.2</b> How to use retrieved data
</a></li>
111 <li class=
"chapter" data-level=
"2.1.3" data-path=
"searching-the-database.html"><a href=
"searching-the-database.html#updating-the-wizard"><i class=
"fa fa-check"></i><b>2.1.3</b> Updating the Wizard
</a></li>
113 <li class=
"chapter" data-level=
"2.2" data-path=
"searching-the-database.html"><a href=
"searching-the-database.html#accessions-and-plot-search"><i class=
"fa fa-check"></i><b>2.2</b> Accessions and Plot Search
</a></li>
114 <li class=
"chapter" data-level=
"2.3" data-path=
"searching-the-database.html"><a href=
"searching-the-database.html#trials-search"><i class=
"fa fa-check"></i><b>2.3</b> Trials Search
</a></li>
115 <li class=
"chapter" data-level=
"2.4" data-path=
"searching-the-database.html"><a href=
"searching-the-database.html#trait-search"><i class=
"fa fa-check"></i><b>2.4</b> Trait Search
</a></li>
116 <li class=
"chapter" data-level=
"2.5" data-path=
"searching-the-database.html"><a href=
"searching-the-database.html#ontology-browser"><i class=
"fa fa-check"></i><b>2.5</b> Ontology Browser
</a></li>
117 <li class=
"chapter" data-level=
"2.6" data-path=
"searching-the-database.html"><a href=
"searching-the-database.html#search-seedlots"><i class=
"fa fa-check"></i><b>2.6</b> Search Seedlots
</a></li>
119 <li class=
"chapter" data-level=
"3" data-path=
"managing-user-roles.html"><a href=
"managing-user-roles.html"><i class=
"fa fa-check"></i><b>3</b> Managing User Roles
</a>
121 <li class=
"chapter" data-level=
"3.1" data-path=
"managing-user-roles.html"><a href=
"managing-user-roles.html#what-are-user-roles"><i class=
"fa fa-check"></i><b>3.1</b> What are User Roles?
</a></li>
122 <li class=
"chapter" data-level=
"3.2" data-path=
"managing-user-roles.html"><a href=
"managing-user-roles.html#the-manage-user-roles-page"><i class=
"fa fa-check"></i><b>3.2</b> The Manage User Roles page
</a></li>
124 <li class=
"chapter" data-level=
"4" data-path=
"managing-breeding-programs.html"><a href=
"managing-breeding-programs.html"><i class=
"fa fa-check"></i><b>4</b> Managing Breeding Programs
</a></li>
125 <li class=
"chapter" data-level=
"5" data-path=
"managing-locations.html"><a href=
"managing-locations.html"><i class=
"fa fa-check"></i><b>5</b> Managing Locations
</a></li>
126 <li class=
"chapter" data-level=
"6" data-path=
"managing-accessions.html"><a href=
"managing-accessions.html"><i class=
"fa fa-check"></i><b>6</b> Managing Accessions
</a>
128 <li class=
"chapter" data-level=
"6.1" data-path=
"managing-accessions.html"><a href=
"managing-accessions.html#add-accessions-using-a-list"><i class=
"fa fa-check"></i><b>6.1</b> Add Accessions Using A List
</a></li>
129 <li class=
"chapter" data-level=
"6.2" data-path=
"managing-accessions.html"><a href=
"managing-accessions.html#uploading-accessions-and-accessions-info-from-a-file"><i class=
"fa fa-check"></i><b>6.2</b> Uploading Accessions and Accession’s Info From A File
</a></li>
130 <li class=
"chapter" data-level=
"6.3" data-path=
"managing-accessions.html"><a href=
"managing-accessions.html#email-alert-for-accession-upload"><i class=
"fa fa-check"></i><b>6.3</b> Email alert for accession upload
</a></li>
131 <li class=
"chapter" data-level=
"6.4" data-path=
"managing-accessions.html"><a href=
"managing-accessions.html#add-parentage-pedigree-information-to-accessions"><i class=
"fa fa-check"></i><b>6.4</b> Add Parentage (Pedigree) Information to Accessions
</a></li>
132 <li class=
"chapter" data-level=
"6.5" data-path=
"managing-accessions.html"><a href=
"managing-accessions.html#working-with-grafts"><i class=
"fa fa-check"></i><b>6.5</b> Working with grafts
</a></li>
133 <li class=
"chapter" data-level=
"6.6" data-path=
"managing-accessions.html"><a href=
"managing-accessions.html#bulk-renaming-of-accessions"><i class=
"fa fa-check"></i><b>6.6</b> Bulk renaming of accessions
</a></li>
135 <li class=
"chapter" data-level=
"7" data-path=
"managing-seed-lots.html"><a href=
"managing-seed-lots.html"><i class=
"fa fa-check"></i><b>7</b> Managing Seed Lots
</a>
137 <li class=
"chapter" data-level=
"7.1" data-path=
"managing-seed-lots.html"><a href=
"managing-seed-lots.html#add-new-seedlots"><i class=
"fa fa-check"></i><b>7.1</b> Add New Seedlot(s)
</a></li>
138 <li class=
"chapter" data-level=
"7.2" data-path=
"managing-seed-lots.html"><a href=
"managing-seed-lots.html#seedlot-transactions"><i class=
"fa fa-check"></i><b>7.2</b> Seedlot Transactions
</a></li>
139 <li class=
"chapter" data-level=
"7.3" data-path=
"managing-seed-lots.html"><a href=
"managing-seed-lots.html#seed-inventory"><i class=
"fa fa-check"></i><b>7.3</b> Seed Inventory
</a></li>
140 <li class=
"chapter" data-level=
"7.4" data-path=
"managing-seed-lots.html"><a href=
"managing-seed-lots.html#find-seedlots-for-a-list-of-accessions"><i class=
"fa fa-check"></i><b>7.4</b> Find Seedlots For a List of Accessions
</a></li>
141 <li class=
"chapter" data-level=
"7.5" data-path=
"managing-seed-lots.html"><a href=
"managing-seed-lots.html#create-a-seedlot-for-an-accession-or-cross"><i class=
"fa fa-check"></i><b>7.5</b> Create a seedlot for an Accession or Cross
</a></li>
142 <li class=
"chapter" data-level=
"7.6" data-path=
"managing-seed-lots.html"><a href=
"managing-seed-lots.html#add-quality-data-to-a-seedlot"><i class=
"fa fa-check"></i><b>7.6</b> Add quality data to a seedlot
</a></li>
143 <li class=
"chapter" data-level=
"7.7" data-path=
"managing-seed-lots.html"><a href=
"managing-seed-lots.html#seedlot-maintenance-events"><i class=
"fa fa-check"></i><b>7.7</b> Seedlot Maintenance Events
</a>
145 <li class=
"chapter" data-level=
"7.7.1" data-path=
"managing-seed-lots.html"><a href=
"managing-seed-lots.html#setup"><i class=
"fa fa-check"></i><b>7.7.1</b> Setup
</a></li>
146 <li class=
"chapter" data-level=
"7.7.2" data-path=
"managing-seed-lots.html"><a href=
"managing-seed-lots.html#adding-events"><i class=
"fa fa-check"></i><b>7.7.2</b> Adding Events
</a></li>
147 <li class=
"chapter" data-level=
"7.7.3" data-path=
"managing-seed-lots.html"><a href=
"managing-seed-lots.html#displaying-events"><i class=
"fa fa-check"></i><b>7.7.3</b> Displaying Events
</a></li>
148 <li class=
"chapter" data-level=
"7.7.4" data-path=
"managing-seed-lots.html"><a href=
"managing-seed-lots.html#downloading-events"><i class=
"fa fa-check"></i><b>7.7.4</b> Downloading Events
</a></li>
150 <li class=
"chapter" data-level=
"7.8" data-path=
"managing-seed-lots.html"><a href=
"managing-seed-lots.html#deleting-seedlots"><i class=
"fa fa-check"></i><b>7.8</b> Deleting Seedlots
</a></li>
152 <li class=
"chapter" data-level=
"8" data-path=
"managing-populations.html"><a href=
"managing-populations.html"><i class=
"fa fa-check"></i><b>8</b> Managing Populations
</a></li>
153 <li class=
"chapter" data-level=
"9" data-path=
"managing-crosses.html"><a href=
"managing-crosses.html"><i class=
"fa fa-check"></i><b>9</b> Managing Crosses
</a>
155 <li class=
"chapter" data-level=
"9.1" data-path=
"managing-crosses.html"><a href=
"managing-crosses.html#crossing-experiment"><i class=
"fa fa-check"></i><b>9.1</b> Crossing Experiment
</a>
157 <li class=
"chapter" data-level=
"9.1.1" data-path=
"managing-crosses.html"><a href=
"managing-crosses.html#add-new-crossing-experiment"><i class=
"fa fa-check"></i><b>9.1.1</b> Add New Crossing Experiment
</a></li>
159 <li class=
"chapter" data-level=
"9.2" data-path=
"managing-crosses.html"><a href=
"managing-crosses.html#cross"><i class=
"fa fa-check"></i><b>9.2</b> Cross
</a>
161 <li class=
"chapter" data-level=
"9.2.1" data-path=
"managing-crosses.html"><a href=
"managing-crosses.html#add-new-crosses"><i class=
"fa fa-check"></i><b>9.2.1</b> Add New Crosses
</a></li>
162 <li class=
"chapter" data-level=
"9.2.2" data-path=
"managing-crosses.html"><a href=
"managing-crosses.html#update-crosses-by-uploading"><i class=
"fa fa-check"></i><b>9.2.2</b> Update Crosses by Uploading
</a></li>
164 <li class=
"chapter" data-level=
"9.3" data-path=
"managing-crosses.html"><a href=
"managing-crosses.html#cross-wishlist"><i class=
"fa fa-check"></i><b>9.3</b> Cross Wishlist
</a>
166 <li class=
"chapter" data-level=
"9.3.1" data-path=
"managing-crosses.html"><a href=
"managing-crosses.html#create-a-cross-wishlist"><i class=
"fa fa-check"></i><b>9.3.1</b> Create a Cross Wishlist
</a></li>
168 <li class=
"chapter" data-level=
"9.4" data-path=
"managing-crosses.html"><a href=
"managing-crosses.html#crossing-experiment-detail-page"><i class=
"fa fa-check"></i><b>9.4</b> Crossing Experiment Detail Page
</a></li>
169 <li class=
"chapter" data-level=
"9.5" data-path=
"managing-crosses.html"><a href=
"managing-crosses.html#cross-detail-page"><i class=
"fa fa-check"></i><b>9.5</b> Cross Detail Page
</a></li>
171 <li class=
"chapter" data-level=
"10" data-path=
"managing-field-trials.html"><a href=
"managing-field-trials.html"><i class=
"fa fa-check"></i><b>10</b> Managing Field Trials
</a>
173 <li class=
"chapter" data-level=
"10.1" data-path=
"managing-field-trials.html"><a href=
"managing-field-trials.html#trial-detail-page"><i class=
"fa fa-check"></i><b>10.1</b> Trial Detail Page
</a></li>
174 <li class=
"chapter" data-level=
"10.2" data-path=
"managing-field-trials.html"><a href=
"managing-field-trials.html#adding-trials"><i class=
"fa fa-check"></i><b>10.2</b> Adding Trials
</a>
176 <li class=
"chapter" data-level=
"10.2.1" data-path=
"managing-field-trials.html"><a href=
"managing-field-trials.html#prerequisites"><i class=
"fa fa-check"></i><b>10.2.1</b> Prerequisites
</a></li>
177 <li class=
"chapter" data-level=
"10.2.2" data-path=
"managing-field-trials.html"><a href=
"managing-field-trials.html#adding-a-trial-by-using-add-trial-form"><i class=
"fa fa-check"></i><b>10.2.2</b> Adding a trial by using “Add Trial” form
</a></li>
178 <li class=
"chapter" data-level=
"10.2.3" data-path=
"managing-field-trials.html"><a href=
"managing-field-trials.html#adding-a-trial-from-an-uploaded-file"><i class=
"fa fa-check"></i><b>10.2.3</b> Adding a trial from an uploaded file
</a></li>
179 <li class=
"chapter" data-level=
"10.2.4" data-path=
"managing-field-trials.html"><a href=
"managing-field-trials.html#multi-location-trials"><i class=
"fa fa-check"></i><b>10.2.4</b> Multi-location trials
</a></li>
180 <li class=
"chapter" data-level=
"10.2.5" data-path=
"managing-field-trials.html"><a href=
"managing-field-trials.html#email-alert-for-multiple-trial-design-upload"><i class=
"fa fa-check"></i><b>10.2.5</b> Email alert for multiple trial design upload
</a></li>
181 <li class=
"chapter" data-level=
"10.2.6" data-path=
"managing-field-trials.html"><a href=
"managing-field-trials.html#viewing-plot-layout-and-trait-heatmap"><i class=
"fa fa-check"></i><b>10.2.6</b> Viewing Plot Layout and Trait HeatMap
</a></li>
182 <li class=
"chapter" data-level=
"10.2.7" data-path=
"managing-field-trials.html"><a href=
"managing-field-trials.html#adding-additional-information-in-the-trial-detail-page"><i class=
"fa fa-check"></i><b>10.2.7</b> Adding additional information in the “Trial Detail” page
</a></li>
183 <li class=
"chapter" data-level=
"10.2.8" data-path=
"managing-field-trials.html"><a href=
"managing-field-trials.html#downloading-the-trial-layout-from-the-trial-detail-page"><i class=
"fa fa-check"></i><b>10.2.8</b> Downloading the Trial Layout from the “Trial Detail” page
</a></li>
184 <li class=
"chapter" data-level=
"10.2.9" data-path=
"managing-field-trials.html"><a href=
"managing-field-trials.html#adding-plant-entries-to-your-trial"><i class=
"fa fa-check"></i><b>10.2.9</b> Adding Plant Entries To Your Trial
</a></li>
185 <li class=
"chapter" data-level=
"10.2.10" data-path=
"managing-field-trials.html"><a href=
"managing-field-trials.html#adding-tissue-sample-entries-to-your-trial"><i class=
"fa fa-check"></i><b>10.2.10</b> Adding Tissue Sample Entries To Your Trial
</a></li>
186 <li class=
"chapter" data-level=
"10.2.11" data-path=
"managing-field-trials.html"><a href=
"managing-field-trials.html#uploading-gps-coordinates-for-plots"><i class=
"fa fa-check"></i><b>10.2.11</b> Uploading GPS Coordinates For Plots
</a></li>
187 <li class=
"chapter" data-level=
"10.2.12" data-path=
"managing-field-trials.html"><a href=
"managing-field-trials.html#uploading-additional-files-to-trial"><i class=
"fa fa-check"></i><b>10.2.12</b> Uploading Additional Files To Trial
</a></li>
188 <li class=
"chapter" data-level=
"10.2.13" data-path=
"managing-field-trials.html"><a href=
"managing-field-trials.html#deleting-trial-data"><i class=
"fa fa-check"></i><b>10.2.13</b> Deleting Trial Data
</a></li>
191 <li class=
"chapter" data-level=
"11" data-path=
"managing-genotyping-plates.html"><a href=
"managing-genotyping-plates.html"><i class=
"fa fa-check"></i><b>11</b> Managing Genotyping Plates
</a>
193 <li class=
"chapter" data-level=
"11.1" data-path=
"managing-genotyping-plates.html"><a href=
"managing-genotyping-plates.html#adding-a-new-genotyping-plate"><i class=
"fa fa-check"></i><b>11.1</b> Adding a New Genotyping Plate
</a></li>
194 <li class=
"chapter" data-level=
"11.2" data-path=
"managing-genotyping-plates.html"><a href=
"managing-genotyping-plates.html#genotyping-plate-detail-page"><i class=
"fa fa-check"></i><b>11.2</b> Genotyping Plate Detail Page
</a></li>
196 <li class=
"chapter" data-level=
"12" data-path=
"using-fieldbook-app.html"><a href=
"using-fieldbook-app.html"><i class=
"fa fa-check"></i><b>12</b> Using Field Book App
</a>
198 <li class=
"chapter" data-level=
"12.1" data-path=
"using-fieldbook-app.html"><a href=
"using-fieldbook-app.html#a-typical-workflow"><i class=
"fa fa-check"></i><b>12.1</b> A typical workflow
</a></li>
199 <li class=
"chapter" data-level=
"12.2" data-path=
"using-fieldbook-app.html"><a href=
"using-fieldbook-app.html#creating-layout-files"><i class=
"fa fa-check"></i><b>12.2</b> Creating Field Layout Files for the Field Book App
</a>
201 <li class=
"chapter" data-level=
"12.2.1" data-path=
"using-fieldbook-app.html"><a href=
"using-fieldbook-app.html#creating-field-layout-files-by-using-field-book-tools-page."><i class=
"fa fa-check"></i><b>12.2.1</b> Creating “Field Layout Files” by using “Field Book Tools” page.
</a></li>
202 <li class=
"chapter" data-level=
"12.2.2" data-path=
"using-fieldbook-app.html"><a href=
"using-fieldbook-app.html#creating-field-layout-files-by-using-trial-detail-page."><i class=
"fa fa-check"></i><b>12.2.2</b> Creating “Field Layout Files” by using “Trial Detail” page.
</a></li>
204 <li class=
"chapter" data-level=
"12.3" data-path=
"using-fieldbook-app.html"><a href=
"using-fieldbook-app.html#creating-trait-files"><i class=
"fa fa-check"></i><b>12.3</b> Creating Trait Files for the Field Book App
</a>
206 <li class=
"chapter" data-level=
"12.3.1" data-path=
"using-fieldbook-app.html"><a href=
"using-fieldbook-app.html#creating-a-trait-list"><i class=
"fa fa-check"></i><b>12.3.1</b> Creating a Trait List
</a></li>
207 <li class=
"chapter" data-level=
"12.3.2" data-path=
"using-fieldbook-app.html"><a href=
"using-fieldbook-app.html#creating-a-trait-file"><i class=
"fa fa-check"></i><b>12.3.2</b> Creating a Trait File
</a></li>
209 <li class=
"chapter" data-level=
"12.4" data-path=
"using-fieldbook-app.html"><a href=
"using-fieldbook-app.html#transferring-files-from-your-computer-to-android-tablet"><i class=
"fa fa-check"></i><b>12.4</b> Transferring Files from Your Computer to Android Tablet
</a>
211 <li class=
"chapter" data-level=
"12.4.1" data-path=
"using-fieldbook-app.html"><a href=
"using-fieldbook-app.html#files-on-your-computer"><i class=
"fa fa-check"></i><b>12.4.1</b> Files on your computer
</a></li>
212 <li class=
"chapter" data-level=
"12.4.2" data-path=
"using-fieldbook-app.html"><a href=
"using-fieldbook-app.html#files-on-your-android-tablet"><i class=
"fa fa-check"></i><b>12.4.2</b> Files on your Android tablet
</a></li>
214 <li class=
"chapter" data-level=
"12.5" data-path=
"using-fieldbook-app.html"><a href=
"using-fieldbook-app.html#setting-up-field-book-app-for-data-collection"><i class=
"fa fa-check"></i><b>12.5</b> Setting up “Field Book App” for data collection
</a></li>
215 <li class=
"chapter" data-level=
"12.6" data-path=
"using-fieldbook-app.html"><a href=
"using-fieldbook-app.html#exporting-files-from-field-book-app"><i class=
"fa fa-check"></i><b>12.6</b> Exporting Files from Field Book App
</a></li>
216 <li class=
"chapter" data-level=
"12.7" data-path=
"using-fieldbook-app.html"><a href=
"using-fieldbook-app.html#uploading-pheno-files"><i class=
"fa fa-check"></i><b>12.7</b> Uploading Phenotype Files to an SGN database
</a></li>
218 <li class=
"chapter" data-level=
"13" data-path=
"managing-phenotypic-data.html"><a href=
"managing-phenotypic-data.html"><i class=
"fa fa-check"></i><b>13</b> Managing Phenotypic Data
</a>
220 <li class=
"chapter" data-level=
"13.1" data-path=
"managing-phenotypic-data.html"><a href=
"managing-phenotypic-data.html#uploading-fieldbook-phenotypes"><i class=
"fa fa-check"></i><b>13.1</b> Uploading Fieldbook Phenotypes
</a>
222 <li class=
"chapter" data-level=
"13.1.1" data-path=
"managing-phenotypic-data.html"><a href=
"managing-phenotypic-data.html#export-field-book-database-file"><i class=
"fa fa-check"></i><b>13.1.1</b> Export Field Book Database File
</a></li>
223 <li class=
"chapter" data-level=
"13.1.2" data-path=
"managing-phenotypic-data.html"><a href=
"managing-phenotypic-data.html#upload-field-book-database-file"><i class=
"fa fa-check"></i><b>13.1.2</b> Upload Field Book Database File
</a></li>
225 <li class=
"chapter" data-level=
"13.2" data-path=
"managing-phenotypic-data.html"><a href=
"managing-phenotypic-data.html#uploading-spreadsheet-phenotypes"><i class=
"fa fa-check"></i><b>13.2</b> Uploading Spreadsheet Phenotypes
</a>
227 <li class=
"chapter" data-level=
"13.2.1" data-path=
"managing-phenotypic-data.html"><a href=
"managing-phenotypic-data.html#generating-spreadsheet-file"><i class=
"fa fa-check"></i><b>13.2.1</b> Generating Spreadsheet File
</a></li>
228 <li class=
"chapter" data-level=
"13.2.2" data-path=
"managing-phenotypic-data.html"><a href=
"managing-phenotypic-data.html#uploading-spreadsheet-file"><i class=
"fa fa-check"></i><b>13.2.2</b> Uploading Spreadsheet File
</a></li>
231 <li class=
"chapter" data-level=
"14" data-path=
"managing-barcodes.html"><a href=
"managing-barcodes.html"><i class=
"fa fa-check"></i><b>14</b> Managing Barcodes
</a></li>
232 <li class=
"chapter" data-level=
"15" data-path=
"using-the-label-designer.html"><a href=
"using-the-label-designer.html"><i class=
"fa fa-check"></i><b>15</b> Using the Label Designer
</a>
234 <li class=
"chapter" data-level=
"15.0.1" data-path=
"using-the-label-designer.html"><a href=
"using-the-label-designer.html#first-select-a-datasource"><i class=
"fa fa-check"></i><b>15.0.1</b> First Select a Datasource
</a></li>
235 <li class=
"chapter" data-level=
"15.0.2" data-path=
"using-the-label-designer.html"><a href=
"using-the-label-designer.html#set-page-and-label-size"><i class=
"fa fa-check"></i><b>15.0.2</b> Set Page and Label Size
</a></li>
236 <li class=
"chapter" data-level=
"15.0.3" data-path=
"using-the-label-designer.html"><a href=
"using-the-label-designer.html#design-your-label"><i class=
"fa fa-check"></i><b>15.0.3</b> Design Your Label
</a></li>
237 <li class=
"chapter" data-level=
"15.0.4" data-path=
"using-the-label-designer.html"><a href=
"using-the-label-designer.html#adjust-formatting-save-and-download"><i class=
"fa fa-check"></i><b>15.0.4</b> Adjust Formatting, Save, and Download
</a></li>
239 <li class=
"chapter" data-level=
"16" data-path=
"managing-downloads.html"><a href=
"managing-downloads.html"><i class=
"fa fa-check"></i><b>16</b> Managing Downloads
</a></li>
240 <li class=
"chapter" data-level=
"17" data-path=
"managing-odk-data-collection.html"><a href=
"managing-odk-data-collection.html"><i class=
"fa fa-check"></i><b>17</b> Managing ODK Data Collection
</a>
242 <li class=
"chapter" data-level=
"17.1" data-path=
"managing-odk-data-collection.html"><a href=
"managing-odk-data-collection.html#ona-crossing-information"><i class=
"fa fa-check"></i><b>17.1</b> ONA Crossing Information
</a>
244 <li class=
"chapter" data-level=
"17.1.1" data-path=
"managing-odk-data-collection.html"><a href=
"managing-odk-data-collection.html#managing-ona-crossing-information"><i class=
"fa fa-check"></i><b>17.1.1</b> Managing ONA Crossing Information
</a></li>
245 <li class=
"chapter" data-level=
"17.1.2" data-path=
"managing-odk-data-collection.html"><a href=
"managing-odk-data-collection.html#reviewing-plant-status"><i class=
"fa fa-check"></i><b>17.1.2</b> Reviewing Plant Status
</a></li>
246 <li class=
"chapter" data-level=
"17.1.3" data-path=
"managing-odk-data-collection.html"><a href=
"managing-odk-data-collection.html#graphical-summary-for-performed-crosses"><i class=
"fa fa-check"></i><b>17.1.3</b> Graphical Summary For Performed Crosses
</a></li>
247 <li class=
"chapter" data-level=
"17.1.4" data-path=
"managing-odk-data-collection.html"><a href=
"managing-odk-data-collection.html#summary-information-for-performed-crosses"><i class=
"fa fa-check"></i><b>17.1.4</b> Summary Information For Performed Crosses
</a></li>
250 <li class=
"chapter" data-level=
"18" data-path=
"managing-tissue-samples.html"><a href=
"managing-tissue-samples.html"><i class=
"fa fa-check"></i><b>18</b> Managing Tissue Samples
</a>
252 <li class=
"chapter" data-level=
"18.1" data-path=
"managing-tissue-samples.html"><a href=
"managing-tissue-samples.html#tissue-samples-from-field-trials"><i class=
"fa fa-check"></i><b>18.1</b> Tissue samples from field trials
</a></li>
253 <li class=
"chapter" data-level=
"18.2" data-path=
"managing-tissue-samples.html"><a href=
"managing-tissue-samples.html#genotyping-plate-tissue-samples-96-or-384-well-plates"><i class=
"fa fa-check"></i><b>18.2</b> Genotyping Plate Tissue Samples (
96 or
384 well plates)
</a></li>
255 <li class=
"chapter" data-level=
"19" data-path=
"managing-observation-variables.html"><a href=
"managing-observation-variables.html"><i class=
"fa fa-check"></i><b>19</b> Managing Observation Variables
</a>
257 <li class=
"chapter" data-level=
"19.1" data-path=
"managing-observation-variables.html"><a href=
"managing-observation-variables.html#managing-observation-variables-with-traits-methods-and-scales"><i class=
"fa fa-check"></i><b>19.1</b> Managing Observation Variables with Traits, Methods, and Scales
</a></li>
259 <li class=
"chapter" data-level=
"20" data-path=
"managing-image-data.html"><a href=
"managing-image-data.html"><i class=
"fa fa-check"></i><b>20</b> Managing Image Data
</a>
261 <li class=
"chapter" data-level=
"20.1" data-path=
"managing-image-data.html"><a href=
"managing-image-data.html#image-phenotyping-dashboard"><i class=
"fa fa-check"></i><b>20.1</b> Image-Phenotyping Dashboard
</a></li>
262 <li class=
"chapter" data-level=
"20.2" data-path=
"managing-image-data.html"><a href=
"managing-image-data.html#image-input"><i class=
"fa fa-check"></i><b>20.2</b> Image Input
</a></li>
263 <li class=
"chapter" data-level=
"20.3" data-path=
"managing-image-data.html"><a href=
"managing-image-data.html#standard-process"><i class=
"fa fa-check"></i><b>20.3</b> Standard Process
</a></li>
264 <li class=
"chapter" data-level=
"20.4" data-path=
"managing-image-data.html"><a href=
"managing-image-data.html#ground-control-points"><i class=
"fa fa-check"></i><b>20.4</b> Ground Control Points
</a></li>
266 <li class=
"chapter" data-level=
"21" data-path=
"managing-vcf-data.html"><a href=
"managing-vcf-data.html"><i class=
"fa fa-check"></i><b>21</b> Managing VCF Data
</a>
268 <li class=
"chapter" data-level=
"21.1" data-path=
"managing-vcf-data.html"><a href=
"managing-vcf-data.html#uploading-vcf-data"><i class=
"fa fa-check"></i><b>21.1</b> Uploading VCF Data
</a></li>
269 <li class=
"chapter" data-level=
"21.2" data-path=
"managing-vcf-data.html"><a href=
"managing-vcf-data.html#searching-and-downloading-vcf-data"><i class=
"fa fa-check"></i><b>21.2</b> Searching and Downloading VCF Data
</a></li>
270 <li class=
"chapter" data-level=
"21.3" data-path=
"managing-vcf-data.html"><a href=
"managing-vcf-data.html#searching-protocols"><i class=
"fa fa-check"></i><b>21.3</b> Searching Protocols
</a></li>
271 <li class=
"chapter" data-level=
"21.4" data-path=
"managing-vcf-data.html"><a href=
"managing-vcf-data.html#detail-pages-and-deletion"><i class=
"fa fa-check"></i><b>21.4</b> Detail Pages and Deletion
</a></li>
273 <li class=
"chapter" data-level=
"22" data-path=
"managing-spectral-data.html"><a href=
"managing-spectral-data.html"><i class=
"fa fa-check"></i><b>22</b> Managing Spectral Data
</a>
275 <li class=
"chapter" data-level=
"22.1" data-path=
"managing-spectral-data.html"><a href=
"managing-spectral-data.html#upload-spectral-data"><i class=
"fa fa-check"></i><b>22.1</b> Upload Spectral Data
</a></li>
276 <li class=
"chapter" data-level=
"22.2" data-path=
"managing-spectral-data.html"><a href=
"managing-spectral-data.html#evaluate-and-remove-outliers"><i class=
"fa fa-check"></i><b>22.2</b> Evaluate and Remove Outliers
</a></li>
277 <li class=
"chapter" data-level=
"22.3" data-path=
"managing-spectral-data.html"><a href=
"managing-spectral-data.html#plot-spectra"><i class=
"fa fa-check"></i><b>22.3</b> Plot Spectra
</a></li>
278 <li class=
"chapter" data-level=
"22.4" data-path=
"managing-spectral-data.html"><a href=
"managing-spectral-data.html#aggregate-spectra"><i class=
"fa fa-check"></i><b>22.4</b> Aggregate Spectra
</a></li>
279 <li class=
"chapter" data-level=
"22.5" data-path=
"managing-spectral-data.html"><a href=
"managing-spectral-data.html#references"><i class=
"fa fa-check"></i><b>22.5</b> References
</a></li>
281 <li class=
"chapter" data-level=
"23" data-path=
"managing-sequence-metadata.html"><a href=
"managing-sequence-metadata.html"><i class=
"fa fa-check"></i><b>23</b> Managing Sequence Metadata
</a>
283 <li class=
"chapter" data-level=
"23.1" data-path=
"managing-sequence-metadata.html"><a href=
"managing-sequence-metadata.html#what-is-sequence-metadata"><i class=
"fa fa-check"></i><b>23.1</b> What is Sequence Metadata?
</a></li>
284 <li class=
"chapter" data-level=
"23.2" data-path=
"managing-sequence-metadata.html"><a href=
"managing-sequence-metadata.html#loading-sequence-metadata"><i class=
"fa fa-check"></i><b>23.2</b> Loading Sequence Metadata
</a></li>
285 <li class=
"chapter" data-level=
"23.3" data-path=
"managing-sequence-metadata.html"><a href=
"managing-sequence-metadata.html#searching-sequence-metadata"><i class=
"fa fa-check"></i><b>23.3</b> Searching Sequence Metadata
</a>
287 <li class=
"chapter" data-level=
"23.3.1" data-path=
"managing-sequence-metadata.html"><a href=
"managing-sequence-metadata.html#basic-search"><i class=
"fa fa-check"></i><b>23.3.1</b> Basic Search
</a></li>
288 <li class=
"chapter" data-level=
"23.3.2" data-path=
"managing-sequence-metadata.html"><a href=
"managing-sequence-metadata.html#advanced-search"><i class=
"fa fa-check"></i><b>23.3.2</b> Advanced Search
</a></li>
290 <li class=
"chapter" data-level=
"23.4" data-path=
"managing-sequence-metadata.html"><a href=
"managing-sequence-metadata.html#marker-integration"><i class=
"fa fa-check"></i><b>23.4</b> Marker Integration
</a></li>
291 <li class=
"chapter" data-level=
"23.5" data-path=
"managing-sequence-metadata.html"><a href=
"managing-sequence-metadata.html#sequence-metadata-api"><i class=
"fa fa-check"></i><b>23.5</b> Sequence Metadata API
</a></li>
293 <li class=
"chapter" data-level=
"24" data-path=
"managing-outliers-in-dataset.html"><a href=
"managing-outliers-in-dataset.html"><i class=
"fa fa-check"></i><b>24</b> Managing Outliers in Dataset
</a>
295 <li class=
"chapter" data-level=
"24.1" data-path=
"managing-outliers-in-dataset.html"><a href=
"managing-outliers-in-dataset.html#what-is-outliers-functionality-in-dataset"><i class=
"fa fa-check"></i><b>24.1</b> What is Outliers Functionality in Dataset ?
</a></li>
296 <li class=
"chapter" data-level=
"24.2" data-path=
"managing-outliers-in-dataset.html"><a href=
"managing-outliers-in-dataset.html#accessing-trait-visualization"><i class=
"fa fa-check"></i><b>24.2</b> Accessing Trait Visualization
</a></li>
297 <li class=
"chapter" data-level=
"24.3" data-path=
"managing-outliers-in-dataset.html"><a href=
"managing-outliers-in-dataset.html#interpreting-visual-elements"><i class=
"fa fa-check"></i><b>24.3</b> Interpreting Visual Elements
</a></li>
298 <li class=
"chapter" data-level=
"24.4" data-path=
"managing-outliers-in-dataset.html"><a href=
"managing-outliers-in-dataset.html#choosing-cut-off-values"><i class=
"fa fa-check"></i><b>24.4</b> Choosing Cut-Off Values
</a></li>
299 <li class=
"chapter" data-level=
"24.5" data-path=
"managing-outliers-in-dataset.html"><a href=
"managing-outliers-in-dataset.html#setting-deviation-multiplier"><i class=
"fa fa-check"></i><b>24.5</b> Setting Deviation Multiplier
</a></li>
300 <li class=
"chapter" data-level=
"24.6" data-path=
"managing-outliers-in-dataset.html"><a href=
"managing-outliers-in-dataset.html#utilizing-graph-controls"><i class=
"fa fa-check"></i><b>24.6</b> Utilizing Graph Controls
</a></li>
302 <li class=
"chapter" data-level=
"25" data-path=
"data-analysis-tools.html"><a href=
"data-analysis-tools.html"><i class=
"fa fa-check"></i><b>25</b> Data Analysis Tools
</a>
304 <li class=
"chapter" data-level=
"25.1" data-path=
"data-analysis-tools.html"><a href=
"data-analysis-tools.html#selection-index"><i class=
"fa fa-check"></i><b>25.1</b> Selection Index
</a></li>
305 <li class=
"chapter" data-level=
"25.2" data-path=
"data-analysis-tools.html"><a href=
"data-analysis-tools.html#genomic-selection"><i class=
"fa fa-check"></i><b>25.2</b> Genomic Selection
</a>
307 <li class=
"chapter" data-level=
"25.2.1" data-path=
"data-analysis-tools.html"><a href=
"data-analysis-tools.html#method-1"><i class=
"fa fa-check"></i><b>25.2.1</b> Building a Model - Method
1:
</a></li>
308 <li class=
"chapter" data-level=
"25.2.2" data-path=
"data-analysis-tools.html"><a href=
"data-analysis-tools.html#method-2"><i class=
"fa fa-check"></i><b>25.2.2</b> Building a Model - Method
2</a></li>
309 <li class=
"chapter" data-level=
"25.2.3" data-path=
"data-analysis-tools.html"><a href=
"data-analysis-tools.html#building-a-model---method-3"><i class=
"fa fa-check"></i><b>25.2.3</b> Building a Model - Method
3</a></li>
311 <li class=
"chapter" data-level=
"25.3" data-path=
"data-analysis-tools.html"><a href=
"data-analysis-tools.html#genome-browsing"><i class=
"fa fa-check"></i><b>25.3</b> Genome Browsing
</a>
313 <li class=
"chapter" data-level=
"25.3.1" data-path=
"data-analysis-tools.html"><a href=
"data-analysis-tools.html#browsing-genotype-data-by-accession"><i class=
"fa fa-check"></i><b>25.3.1</b> Browsing Genotype data by Accession
</a></li>
314 <li class=
"chapter" data-level=
"25.3.2" data-path=
"data-analysis-tools.html"><a href=
"data-analysis-tools.html#browsing-genotype-data-by-trial"><i class=
"fa fa-check"></i><b>25.3.2</b> Browsing Genotype data by Trial
</a></li>
316 <li class=
"chapter" data-level=
"25.4" data-path=
"data-analysis-tools.html"><a href=
"data-analysis-tools.html#principal-component-analysis-pca"><i class=
"fa fa-check"></i><b>25.4</b> Principal Component Analysis (PCA)
</a></li>
317 <li class=
"chapter" data-level=
"25.5" data-path=
"data-analysis-tools.html"><a href=
"data-analysis-tools.html#anova"><i class=
"fa fa-check"></i><b>25.5</b> ANOVA
</a></li>
318 <li class=
"chapter" data-level=
"25.6" data-path=
"data-analysis-tools.html"><a href=
"data-analysis-tools.html#clustering-k-means-hierarchical"><i class=
"fa fa-check"></i><b>25.6</b> Clustering (K-Means, Hierarchical)
</a></li>
319 <li class=
"chapter" data-level=
"25.7" data-path=
"data-analysis-tools.html"><a href=
"data-analysis-tools.html#genetic-gain"><i class=
"fa fa-check"></i><b>25.7</b> Genetic Gain
</a></li>
320 <li class=
"chapter" data-level=
"25.8" data-path=
"data-analysis-tools.html"><a href=
"data-analysis-tools.html#kinship-and-inbreeding-coefficients"><i class=
"fa fa-check"></i><b>25.8</b> Kinship and Inbreeding Coefficients
</a></li>
321 <li class=
"chapter" data-level=
"25.9" data-path=
"data-analysis-tools.html"><a href=
"data-analysis-tools.html#creating-crossing-groups"><i class=
"fa fa-check"></i><b>25.9</b> Creating Crossing Groups
</a></li>
322 <li class=
"chapter" data-level=
"25.10" data-path=
"data-analysis-tools.html"><a href=
"data-analysis-tools.html#search-wizard-genomic-relationship-matrix-grm-download"><i class=
"fa fa-check"></i><b>25.10</b> Search Wizard Genomic Relationship Matrix (GRM) Download
</a></li>
323 <li class=
"chapter" data-level=
"25.11" data-path=
"data-analysis-tools.html"><a href=
"data-analysis-tools.html#search-wizard-genome-wide-association-study-gwas"><i class=
"fa fa-check"></i><b>25.11</b> Search Wizard Genome Wide Association Study (GWAS)
</a></li>
324 <li class=
"chapter" data-level=
"25.12" data-path=
"data-analysis-tools.html"><a href=
"data-analysis-tools.html#spectral-analysis"><i class=
"fa fa-check"></i><b>25.12</b> Spectral Analysis
</a>
326 <li class=
"chapter" data-level=
"25.12.1" data-path=
"data-analysis-tools.html"><a href=
"data-analysis-tools.html#dataset-selection"><i class=
"fa fa-check"></i><b>25.12.1</b> Dataset selection
</a></li>
327 <li class=
"chapter" data-level=
"25.12.2" data-path=
"data-analysis-tools.html"><a href=
"data-analysis-tools.html#cross-validation"><i class=
"fa fa-check"></i><b>25.12.2</b> Cross-validation
</a></li>
328 <li class=
"chapter" data-level=
"25.12.3" data-path=
"data-analysis-tools.html"><a href=
"data-analysis-tools.html#preprocessing"><i class=
"fa fa-check"></i><b>25.12.3</b> Preprocessing
</a></li>
329 <li class=
"chapter" data-level=
"25.12.4" data-path=
"data-analysis-tools.html"><a href=
"data-analysis-tools.html#algorithms"><i class=
"fa fa-check"></i><b>25.12.4</b> Algorithms
</a></li>
330 <li class=
"chapter" data-level=
"25.12.5" data-path=
"data-analysis-tools.html"><a href=
"data-analysis-tools.html#output-common-model-summary-statistics"><i class=
"fa fa-check"></i><b>25.12.5</b> Output: common model summary statistics
</a></li>
331 <li class=
"chapter" data-level=
"25.12.6" data-path=
"data-analysis-tools.html"><a href=
"data-analysis-tools.html#export-model-for-later-use"><i class=
"fa fa-check"></i><b>25.12.6</b> Export model for later use
</a></li>
332 <li class=
"chapter" data-level=
"25.12.7" data-path=
"data-analysis-tools.html"><a href=
"data-analysis-tools.html#predict-phenotypes-from-an-exported-model-routine-use"><i class=
"fa fa-check"></i><b>25.12.7</b> Predict phenotypes from an exported model (routine use)
</a></li>
333 <li class=
"chapter" data-level=
"25.12.8" data-path=
"data-analysis-tools.html"><a href=
"data-analysis-tools.html#faq"><i class=
"fa fa-check"></i><b>25.12.8</b> FAQ
</a></li>
335 <li class=
"chapter" data-level=
"25.13" data-path=
"data-analysis-tools.html"><a href=
"data-analysis-tools.html#general-mixed-model-tool"><i class=
"fa fa-check"></i><b>25.13</b> General Mixed Model Tool
</a></li>
336 <li class=
"chapter" data-level=
"25.14" data-path=
"data-analysis-tools.html"><a href=
"data-analysis-tools.html#genomic-prediction-of-cross-performance-gcpc"><i class=
"fa fa-check"></i><b>25.14</b> Genomic Prediction of Cross Performance (GCPC)
</a></li>
338 <li class=
"divider"></li>
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356 <section class=
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357 <div id=
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358 <h1><span class=
"header-section-number">Chapter
16</span> Managing Downloads
<a href=
"managing-downloads.html#managing-downloads" class=
"anchor-section" aria-label=
"Anchor link to header"></a></h1>
359 <p>You can download phenotype, trial meta-data, pedigree, GBS genotype and GBS genotype QC files from the database to your computer by using “Lists”. To download, clicking on “Download” in the “Manage” menu.
</p>
360 <p><img src=
"assets/images/image255.png" width=
"95%" style=
"display: block; margin: auto;" /></p>
361 <p>For each category, you can select a list of accessions from your “Lists” to download their phenotypes, pedigree, GBS genotype, GBS genotype QC. In the case of downloading trial meta-data, you would provide a list of trials, while for downloading phenotype and GBS genotype QC, you can also use a list of trials or traits.
</p>
362 <p><img src=
"assets/images/trial_meta_data_download.png" width=
"95%" style=
"display: block; margin: auto;" /></p>
363 <p><img src=
"assets/images/image287.png" width=
"95%" style=
"display: block; margin: auto;" /></p>
364 <p><img src=
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