4 auto-generated-by: OBO-Edit 2.3.1
5 default-namespace: solanaceae_phenotype
10 def: "The color of the placenta." [SGN:NM]
12 is_a: SP:0000012 ! fruit color
17 synonym: "TO:0000620" RELATED []
19 is_a: SP:0000205 ! whole plant phenotype
24 synonym: "TO:0000207" RELATED []
29 is_a: SP:0000205 ! whole plant phenotype
34 synonym: "TO:0000357" RELATED []
36 is_a: SP:0000205 ! whole plant phenotype
41 synonym: "TO:0000419" RELATED []
45 is_a: SP:0000108 ! leaf
50 synonym: "TO:0000326" RELATED []
53 is_a: SP:0000108 ! leaf
58 def: "Traits and phenotypes related to flowering." []
61 is_a: SP:0001000 ! Solanaceae phenotype ontology
66 synonym: "TO:0000373" RELATED []
69 relationship: part_of SP:0000192 ! shoot phenotype
73 name: flower morphology
74 synonym: "TO:0000499" RELATED []
78 relationship: part_of SP:0000115 ! flower
83 synonym: "TO:0000537" RELATED []
87 relationship: part_of SP:0000115 ! flower
95 is_a: SP:0000011 ! fruit morphology
99 name: fruit morphology
103 relationship: part_of SP:0000037 ! fruit
112 relationship: part_of SP:0000037 ! fruit
117 def: "Fruit ripening process." [SGN:NM]
120 is_a: SP:0000037 ! fruit
125 synonym: "TO:0000485" RELATED []
128 is_a: SP:0001000 ! Solanaceae phenotype ontology
132 name: disease and stress response
133 synonym: "TO:0000063" RELATED []
137 is_a: SP:0000205 ! whole plant phenotype
141 name: anthocyanin content
142 synonym: "TO:0000071" RELATED []
143 is_a: SP:0000019 ! biochemical metabolites
147 name: chlorophyll content
148 synonym: "TO:0000495" RELATED []
149 is_a: SP:0000019 ! biochemical metabolites
153 name: hair modifications
154 synonym: "trichomes" RELATED []
156 is_a: SP:0001000 ! Solanaceae phenotype ontology
160 name: biochemical metabolites
161 synonym: "TO:0000277" RELATED []
162 is_a: SP:0001000 ! Solanaceae phenotype ontology
166 name: root modifications
169 is_a: SP:0001000 ! Solanaceae phenotype ontology
173 name: extremely small plant
178 is_a: SP:0000002 ! plant size
187 is_a: SP:0000002 ! plant size
196 is_a: SP:0000002 ! plant size
200 name: seed morphology
204 is_a: SP:0000100 ! seed
208 name: nutritional or hormonal disorder
209 is_a: SP:0001000 ! Solanaceae phenotype ontology
214 def: "Chlorophyll deficiency localized at growing point." [TGRC:F]
218 is_a: SP:0000054 ! yellow-green leaf
222 name: disease resistance
226 is_a: SP:0000015 ! disease and stress response
230 name: brown green leaf color
231 def: "Olive, brown, blue-green leaf." [TGRC:U]
235 is_a: SP:0000005 ! leaf color
239 name: allozyme variant
240 is_a: SP:0001000 ! Solanaceae phenotype ontology
244 name: vascular tissue
245 is_a: SP:0001000 ! Solanaceae phenotype ontology
249 name: internode length
250 synonym: "TO:0000145" RELATED []
254 is_a: SP:0000003 ! plant habit
259 synonym: "TO:0000361" RELATED []
262 is_a: SP:0000003 ! plant habit
267 synonym: "TO:0000195" RELATED []
271 is_a: SP:0000003 ! plant habit
275 name: other plant habit
276 def: "OBSOLETE. Use parent term instead SP:0000003." [SGN:NM]
282 name: nutritional disorder
283 is_a: SP:0000019 ! biochemical metabolites
287 name: hormonal disorder
288 is_a: SP:0000019 ! biochemical metabolites
293 def: "Fruit related traits and phenotypes." [SP:NM]
297 is_a: SP:0001000 ! Solanaceae phenotype ontology
302 def: "The shape of a fruit." [SGN:NM]
306 is_a: SP:0000011 ! fruit morphology
310 name: fruit shape index
311 def: "Shape ratio." [SGN:EVDK]
315 is_a: SP:0000038 ! fruit shape
319 name: fruit shape index external
320 def: "Maximum height/maximum width ratio." [SGN:EVDK]
321 synonym: "fruit shape index 1" RELATED []
325 is_a: SP:0000039 ! fruit shape index
330 synonym: "TO:0000370" RELATED []
334 is_a: SP:0000042 ! leaf size
339 synonym: "TO:0000542" RELATED []
343 is_a: SP:0000004 ! leaf morphology
351 is_a: SP:0000004 ! leaf morphology
355 name: leaf complexity
357 synonym: "leaf complexity" EXACT []
361 is_a: SP:0000004 ! leaf morphology
365 name: fruit shape index external 2
366 def: "Midheight/midwidth ratio." [SGN:EVDK]
367 synonym: "fruit shape index 2" RELATED []
371 is_a: SP:0000039 ! fruit shape index
376 def: "Swollen storage shoot with determinate growth." [POC:curators]
377 xref: PO:0004547 "subterranean tuber"
378 is_a: SP:0000192 ! shoot phenotype
382 name: shape index internal
383 def: "Internal ellipse height/width ratio." [SGN:EVDK]
384 synonym: "pei" RELATED []
385 synonym: "pericarp elongation index" RELATED []
389 is_a: SP:0000039 ! fruit shape index
393 name: fruit shape triangle
394 def: "Proximal/distal width ratio." [SGN:EVDK]
395 synonym: "tri" RELATED []
400 is_a: SP:0000038 ! fruit shape
404 name: fruit shape circular
405 def: "Fitting precision R2. How well the boundary of a perfect circle fits the boundary of a fruit." [SGN:EVDK]
406 synonym: "cir" RELATED []
410 is_a: SP:0000038 ! fruit shape
418 is_a: SP:0000005 ! leaf color
426 is_a: SP:0000005 ! leaf color
434 is_a: SP:0000005 ! leaf color
438 name: yellow-green leaf
442 is_a: SP:0000005 ! leaf color
446 name: dull green/grey leaf
450 is_a: SP:0000005 ! leaf color
454 name: dark green leaf
458 is_a: SP:0000005 ! leaf color
462 name: leaf variegation
463 synonym: "TO:0000069" RELATED []
467 is_a: SP:0000005 ! leaf color
471 name: fruit shape eccentric
472 def: "The asymmetry of the fruit. Height of internal ellipse / total height." [SGN:EVDK]
473 synonym: "ecc" EXACT []
474 synonym: "eccenticity" RELATED []
478 is_a: SP:0000038 ! fruit shape
483 def: "1/2fOb(y) x Tob. The degree of pear-shapeness." [SGN:EVDK]
484 synonym: "obo" RELATED []
485 synonym: "obovate" RELATED []
486 synonym: "pear shape" RELATED []
490 is_a: SP:0000058 ! fruit shape eccentric
495 def: "1/2fOv(y) x Tov. The opposite of pear-shapeness." [SGN:EVDK]
496 synonym: "ovate" RELATED []
497 synonym: "ovo" RELATED []
501 is_a: SP:0000058 ! fruit shape eccentric
505 name: flowering timing
506 synonym: "TO:0000344" RELATED []
507 synonym: "TO:0000366" RELATED []
511 relationship: part_of SP:0000006 ! flowering
516 def: "0.25 x [1/2fOv(y) x Tov] + 20 x [(H_sl + H_sr)/2*H] the degree of heart shapeness." [SGN:EVDK]
517 synonym: "hrt" RELATED []
522 is_a: SP:0000038 ! fruit shape
526 name: distal eccentricity index
527 def: "Internal ellipse height / height top ellipse-bottom fruit ratio." [SGN:EVDK]
528 synonym: "dec" RELATED []
532 is_a: SP:0000058 ! fruit shape eccentric
536 name: proximal eccentricity index
537 def: "internal ellipse height/height bottom ellipse-top fruit ratio ." [SGN:EVDK]
538 synonym: "pec" RELATED []
542 is_a: SP:0000058 ! fruit shape eccentric
546 name: horizontal asymmetry
547 def: "[sum|n-ny|]/L. Degree of horizontal asymmetry ." [SGN:EVDK]
548 synonym: "hor" RELATED []
552 is_a: SP:0000058 ! fruit shape eccentric
556 name: vertical asymmetry
557 def: "[sum|m-mi|]/L. Degree of vertical asymmetry ." [SGN:EVDK]
558 synonym: "ver" RELATED []
562 is_a: SP:0000058 ! fruit shape eccentric
566 name: fruit shape ellipsoid
567 def: "Fitting precision R2. How well the boundary of a perfect ellipse fits the boundary of a fruit." [SGN:EVDK]
568 synonym: "ell" RELATED []
572 is_a: SP:0000038 ! fruit shape
576 name: fruit shape rectangular
577 def: "Sin/Sout. The ratio of maximum area inscribing the rectangle to the minimum area of the enclosing rectangle." [PMID:16684933]
578 synonym: "rec" RELATED []
583 is_a: SP:0000038 ! fruit shape
588 def: "The ends of the fruit." [SGN:EVDK]
592 relationship: part_of SP:0000037 ! fruit
596 name: distal fruit end shape
597 def: "The shape of the distal end of the fruit." [SGN:EVDK]
598 synonym: "blossom end" RELATED []
604 is_a: SP:0000038 ! fruit shape
605 is_a: SP:0000179 ! distal fruit end
609 name: inflorescence structure
613 is_a: SP:0000007 ! inflorescence
617 name: proximal fruit end shape
618 def: "The shape of the proximal end of the fruit." [SGN:EVDK]
619 synonym: "stem end" RELATED []
625 is_a: SP:0000038 ! fruit shape
626 is_a: SP:0000180 ! proximal fruit end
630 name: distal fruit end angle
631 def: "Angle between intersection of two lines representing the slope at the fruit distal end." [SGN:evdk]
632 synonym: "dan" RELATED []
637 is_a: SP:0000070 ! distal fruit end shape
641 name: proximal fruit end angle
642 def: "Angle between intersection of two lines representing the slope of the proximal fruit end." [SGN:EVDK]
643 synonym: "pan" RELATED []
649 is_a: SP:0000072 ! proximal fruit end shape
653 name: distal fruit end blockiness
654 def: "Distal fruit end width/mid width ratio." [SGN:EVDK]
655 synonym: "dblk" RELATED []
660 is_a: SP:0000070 ! distal fruit end shape
664 name: distal fruit end indentation
665 def: "Fruit end indented area/total fruit area." [SGN:EVDK]
666 synonym: "diar" RELATED []
671 is_a: SP:0000070 ! distal fruit end shape
675 name: distal fruit end protrusion
676 def: "Distal fruit end protruded area/total fruit area." [SGN:EVDK]
677 synonym: "nipple tip" RELATED []
682 is_a: SP:0000070 ! distal fruit end shape
686 name: proximal fruit end blockiness
687 def: "Proximal fruit end proximal end width/mid width ratio." [SGN:EVDK]
688 synonym: "pblk" RELATED []
693 is_a: SP:0000072 ! proximal fruit end shape
697 name: proximal fruit end indentation
698 def: "Proximal fruit end indented area/total fruit area." [SGN:EVDK]
703 is_a: SP:0000072 ! proximal fruit end shape
708 def: "The mass of the fruit measured in grams." [SGN:EVDK]
709 synonym: "fruit weight" RELATED []
710 synonym: "fw" RELATED []
715 relationship: variable_of SP:0000037 ! fruit
717 creation_date: 2008-02-12T03:11:00Z
721 name: homeotic mutation
724 is_a: SP:0000008 ! flower morphology
728 name: flower organ size
732 is_a: SP:0000008 ! flower morphology
736 name: flower organ width
740 is_a: SP:0000082 ! flower organ size
744 name: other flower morphology
745 def: "OBSOLETE. Replaced by parent term SP:0000008 flower morphology." [SGN:nm]
752 def: "The area of the fruit." [SGN:EVDK]
757 is_a: SP:0000010 ! fruit size
759 creation_date: 2008-02-12T03:11:00Z
764 def: "The length of the fruit." [SGN:EVDK]
765 synonym: "fruit height" EXACT []
769 is_a: SP:0000010 ! fruit size
771 creation_date: 2008-02-12T03:11:00Z
775 name: fruit perimeter
776 def: "The maximum perimeter of the fruit." [SGN:EVDK]
777 synonym: "fruit circumference" RELATED []
778 synonym: "per" RELATED []
783 is_a: SP:0000010 ! fruit size
785 creation_date: 2008-02-12T03:11:00Z
790 def: "The width of the fruit." [SGN:EVDK]
791 synonym: "fd1" RELATED []
792 synonym: "fruit diameter" RELATED []
796 is_a: SP:0000010 ! fruit size
798 creation_date: 2008-02-12T03:11:00Z
802 name: fruit locule number
803 def: "The number of locules in the fruit." [SGN:EVDK]
804 synonym: "lcn" RELATED []
808 relationship: variable_of SP:0000011 ! fruit morphology
810 creation_date: 2008-02-12T03:30:00Z
815 def: "The area of the placenta." [SGN:EVDK]
819 is_a: SP:0000010 ! fruit size
821 creation_date: 2008-02-13T09:41:00Z
829 is_a: SP:0000009 ! flower color
833 name: pale yellow flower
837 is_a: SP:0000228 ! yellow flower color
841 name: strong yellow flower
845 is_a: SP:0000228 ! yellow flower color
849 name: fruit color uniformity
850 def: "The proportion of the 2D area of the red color epicarp out of the total epicarp area visible from a top view of the proximal fruit end." [SGN:EVDK]
854 is_a: SP:0000012 ! fruit color
856 creation_date: 2008-02-13T10:05:00Z
861 def: "The area of the pericarp." [SGN:EVDK]
865 relationship: part_of SP:0000371 ! pericarp
867 creation_date: 2008-02-12T03:36:00Z
872 def: "The sum of the areas of the septum and the pericarp." [SGN:EVDK]
876 is_a: SP:0000010 ! fruit size
878 creation_date: 2008-02-12T03:36:00Z
887 is_a: SP:0000012 ! fruit color
889 creation_date: 2008-02-12T03:40:00Z
898 is_a: SP:0000012 ! fruit color
900 creation_date: 2008-02-12T03:40:00Z
909 is_a: SP:0000012 ! fruit color
911 creation_date: 2008-02-12T03:40:00Z
918 is_a: SP:0001000 ! Solanaceae phenotype ontology
920 creation_date: 2008-02-22T10:02:00Z
929 is_a: SP:0000010 ! fruit size
937 is_a: SP:0000010 ! fruit size
941 name: fruit lobedness degree
942 def: "Fruit bumpiness index." [SGN:EVDK]
943 synonym: "fruit bumpiness" RELATED []
948 is_a: SP:0000038 ! fruit shape
950 creation_date: 2008-02-22T10:26:00Z
958 is_a: SP:0000100 ! seed
960 creation_date: 2008-02-22T10:27:00Z
965 def: "Average number of seeds per fruit." [SGN:EVDK]
969 is_a: SP:0000100 ! seed
971 creation_date: 2008-02-22T10:27:00Z
976 def: "Number of fruits per plant." [SGM:NM]
979 is_a: SP:0000037 ! fruit
980 is_a: SP:0000198 ! yield
982 creation_date: 2008-02-22T10:28:00Z
986 name: Percent of fruits with less than 10 seeds
989 is_a: SP:0000106 ! fruit number
991 creation_date: 2008-02-22T10:29:00Z
998 is_a: SP:0001000 ! Solanaceae phenotype ontology
1000 creation_date: 2008-02-22T10:30:00Z
1008 is_a: SP:0000108 ! leaf
1010 creation_date: 2008-02-22T10:30:00Z
1017 is_a: SP:0000001 ! seedling
1025 is_a: SP:0000038 ! fruit shape
1033 is_a: SP:0000038 ! fruit shape
1037 name: other fruit morphology
1045 name: number of leaves to 1st inflorescence
1049 is_a: SP:0000109 ! leaf number
1051 creation_date: 2008-02-22T10:30:00Z
1056 def: "Flower related traits and phenotypes." []
1059 is_a: SP:0001000 ! Solanaceae phenotype ontology
1061 creation_date: 2008-02-22T10:47:00Z
1065 name: number of flowers per inflorescence
1066 def: "Count of the number of flowers per one inflorescence." []
1070 is_a: SP:0000007 ! inflorescence
1071 relationship: part_of SP:0000117 ! flower number
1073 creation_date: 2008-02-22T10:47:00Z
1078 synonym: "count" RELATED []
1082 is_a: SP:0000115 ! flower
1084 creation_date: 2008-02-22T10:47:00Z
1088 name: fruit glossiness
1092 is_a: SP:0000097 ! epicarp color
1094 creation_date: 2008-02-22T10:47:00Z
1098 name: fruit firmness
1103 is_a: SP:0000013 ! fruit ripening
1105 creation_date: 2008-02-22T10:47:00Z
1109 name: seedling lethal
1114 is_a: SP:0000001 ! seedling
1123 is_a: SP:0000012 ! fruit color
1132 is_a: SP:0000012 ! fruit color
1136 name: dark red fruit
1141 is_a: SP:0000012 ! fruit color
1145 name: epicarp texture
1149 is_a: SP:0000011 ! fruit morphology
1158 is_a: SP:0000012 ! fruit color
1162 name: days to first flowering
1163 def: "Opening of third inflorescence after transplanting." [SGN:EVDK]
1167 is_a: SP:0000061 ! flowering timing
1169 creation_date: 2008-02-22T03:31:00Z
1173 name: radial fruit cracking
1177 is_a: SP:0000124 ! epicarp texture
1179 creation_date: 2008-02-22T10:47:00Z
1183 name: plant habit index
1184 synonym: "growth habit" RELATED []
1185 synonym: "plant habit " RELATED []
1186 is_a: SP:0000003 ! plant habit
1188 creation_date: 2008-02-22T10:47:00Z
1192 name: fruits per flower
1193 def: "A measure of how many flowers develop into fruit." [SGN:EVDK]
1197 is_a: SP:0000106 ! fruit number
1199 creation_date: 2008-02-22T03:36:00Z
1203 name: slow germination
1208 is_a: SP:0000110 ! germination
1216 is_a: SP:0000365 ! fruit ripening timing
1224 is_a: SP:0000365 ! fruit ripening timing
1228 name: fruit mid-height width
1233 is_a: SP:0000088 ! fruit width
1235 creation_date: 2008-03-12T01:08:00Z
1239 name: fruit widest width
1240 synonym: "fruit maximum width" RELATED []
1244 is_a: SP:0000088 ! fruit width
1246 creation_date: 2008-03-12T01:08:00Z
1250 name: fruit length mid-width
1251 synonym: "height mid-width" EXACT []
1256 is_a: SP:0000086 ! fruit length
1258 creation_date: 2008-03-12T01:11:00Z
1262 name: fruit longest length
1263 synonym: "fruit highest height" EXACT []
1268 is_a: SP:0000086 ! fruit length
1270 creation_date: 2008-03-12T01:11:00Z
1274 name: proximal fruit end blockiness 5%
1278 is_a: SP:0000078 ! proximal fruit end blockiness
1280 creation_date: 2008-03-12T01:26:00Z
1284 name: proximal fruit end blockiness 10%
1288 is_a: SP:0000078 ! proximal fruit end blockiness
1290 creation_date: 2008-03-12T01:26:00Z
1294 name: proximal fruit end blockiness 20%
1298 is_a: SP:0000078 ! proximal fruit end blockiness
1300 creation_date: 2008-03-12T01:26:00Z
1304 name: proximal fruit end blockiness 30%
1308 is_a: SP:0000078 ! proximal fruit end blockiness
1310 creation_date: 2008-03-12T01:26:00Z
1314 name: partial sterility
1318 is_a: SP:0000014 ! sterility
1322 name: full sterility
1326 is_a: SP:0000014 ! sterility
1330 name: distal fruit end blockiness 5%
1334 is_a: SP:0000075 ! distal fruit end blockiness
1336 creation_date: 2008-03-12T01:26:00Z
1340 name: distal fruit end blockiness 10%
1344 is_a: SP:0000075 ! distal fruit end blockiness
1346 creation_date: 2008-03-12T01:26:00Z
1350 name: distal fruit end blockiness 20%
1354 is_a: SP:0000075 ! distal fruit end blockiness
1356 creation_date: 2008-03-12T01:26:00Z
1360 name: distal fruit end blockiness 30%
1364 is_a: SP:0000075 ! distal fruit end blockiness
1366 creation_date: 2008-03-12T01:26:00Z
1370 name: fruit shape triangle 5%
1374 is_a: SP:0000049 ! fruit shape triangle
1376 creation_date: 2008-03-12T01:27:00Z
1380 name: fruit shape triangle 10%
1384 is_a: SP:0000049 ! fruit shape triangle
1386 creation_date: 2008-03-12T01:27:00Z
1390 name: fruit shape triangle 20%
1394 is_a: SP:0000049 ! fruit shape triangle
1396 creation_date: 2008-03-12T01:27:00Z
1400 name: fruit shape triangle 30%
1404 is_a: SP:0000049 ! fruit shape triangle
1406 creation_date: 2008-03-12T01:27:00Z
1414 is_a: SP:0000015 ! disease and stress response
1423 is_a: SP:0000015 ! disease and stress response
1427 name: other disease response
1428 def: "OBSOLETE. Replaced by parent term SP:0000015 (disease and stress response)." [SGN:nm]
1436 name: proximal fruit end height
1437 synonym: "shoulder height" RELATED []
1443 is_a: SP:0000072 ! proximal fruit end shape
1445 creation_date: 2008-03-17T01:50:00Z
1449 name: distal angle micro 2%
1450 is_a: SP:0000073 ! distal fruit end angle
1452 creation_date: 2008-03-25T11:13:00Z
1456 name: distal angle micro 3%
1457 is_a: SP:0000073 ! distal fruit end angle
1459 creation_date: 2008-03-25T11:13:00Z
1463 name: distal angle micro 5%
1464 is_a: SP:0000073 ! distal fruit end angle
1466 creation_date: 2008-03-25T11:13:00Z
1470 name: distal angle macro 10%
1471 is_a: SP:0000073 ! distal fruit end angle
1473 creation_date: 2008-03-25T11:13:00Z
1477 name: distal angle macro 15%
1478 is_a: SP:0000073 ! distal fruit end angle
1480 creation_date: 2008-03-25T11:13:00Z
1484 name: distal angle macro 20%
1485 is_a: SP:0000073 ! distal fruit end angle
1487 creation_date: 2008-03-25T11:13:00Z
1491 name: horizontal asymmetry obovoid
1492 is_a: SP:0000065 ! horizontal asymmetry
1494 creation_date: 2008-03-25T11:17:00Z
1498 name: horizontal asymmetry ovoid
1499 is_a: SP:0000065 ! horizontal asymmetry
1501 creation_date: 2008-03-25T11:17:00Z
1505 name: distal angle macro 25%
1506 is_a: SP:0000073 ! distal fruit end angle
1508 creation_date: 2008-03-25T11:19:00Z
1512 name: eccentricity area index
1513 def: "Area ellipse / total fruit area." [SGN:EVDK]
1514 synonym: "obovate (ellipse)" RELATED []
1515 synonym: "oel" EXACT []
1519 is_a: SP:0000058 ! fruit shape eccentric
1521 creation_date: 2008-03-31T10:09:00Z
1525 name: total soluble solids
1526 def: "The total soluble solids in the fruit (usually sugars and acids)." [SGN:NM]
1527 synonym: "Brix" EXACT []
1528 is_a: SP:0000167 ! fruit metabolites
1529 is_a: SP:0000385 ! sugars
1534 def: "Citric acid content in the fruit." [SGN:NM]
1535 is_a: SP:0000019 ! biochemical metabolites
1536 is_a: SP:0000167 ! fruit metabolites
1540 name: fruit metabolites
1541 def: "The metabolites present in the fruit." [SGN:NM]
1542 relationship: part_of SP:0000037 ! fruit
1547 def: "Malic acid content in the fruit." [SGN:NM]
1548 is_a: SP:0000019 ! biochemical metabolites
1549 is_a: SP:0000167 ! fruit metabolites
1554 def: "Glutamic acid content." [SGN:NM]
1555 is_a: SP:0000019 ! biochemical metabolites
1556 is_a: SP:0000167 ! fruit metabolites
1561 def: "The pH of the fruit." [SGN:NM]
1562 is_a: SP:0000167 ! fruit metabolites
1566 name: Total organic acids
1567 def: "The total content of organic acids." [SGN:NM]
1568 is_a: SP:0000019 ! biochemical metabolites
1569 is_a: SP:0000167 ! fruit metabolites
1574 def: "The total acid content." [SGN:NM]
1575 is_a: SP:0000019 ! biochemical metabolites
1576 is_a: SP:0000167 ! fruit metabolites
1581 def: "Fasciated fruit shape. Multipe locules." [SGN:NM]
1583 is_a: SP:0000038 ! fruit shape
1588 def: "Determinate growth of plant branches terminating with an inflorescence." [SGN:NM]
1589 is_a: SP:0000128 ! plant habit index
1593 name: semi determinate
1594 def: "Semi-determinate growth of plant branches producing more inflorescences than determinate plants, but eventually terminating." [SGN:NM]
1595 is_a: SP:0000128 ! plant habit index
1600 def: "Ineterminate growth of plant branches. Continual twig elongation and bud formation." [SGN:NM]
1601 is_a: SP:0000128 ! plant habit index
1609 is_a: SP:0000045 ! leaf complexity
1617 is_a: SP:0000045 ! leaf complexity
1621 name: distal fruit end
1622 def: "The distal end of the fruit (tip)." [SGN:NM]
1624 is_a: SP:0000069 ! fruit end
1628 name: proximal fruit end
1629 def: "The proximal end of the fruit (shoulders)." [SGN:NM]
1630 synonym: "shoulders" EXACT []
1632 is_a: SP:0000069 ! fruit end
1636 name: distal fruit end color
1637 def: "The color of the distal fruit end." [SGN:NM]
1640 is_a: SP:0000012 ! fruit color
1641 is_a: SP:0000179 ! distal fruit end
1645 name: proximal fruit end color
1646 def: "The color of the proximal fruit end (shoulders)." [SGN:NM]
1649 is_a: SP:0000012 ! fruit color
1650 is_a: SP:0000180 ! proximal fruit end
1655 def: "The leaf vascular tissue." [SGN:NM]
1657 is_a: SP:0000004 ! leaf morphology
1661 name: tuber epidermis
1662 def: "Epidermal layer of a tuber." [SGN:NM]
1663 synonym: "tuber skin" EXACT []
1664 xref: PO:0025048 "subterranean tuber epidermis"
1665 relationship: part_of SP:0000047 ! tuber
1669 name: tuber epidermis color
1670 def: "The color of the tuber epidermal layer." [SGN:NM]
1671 synonym: "skin color" EXACT []
1674 is_a: SP:0000184 ! tuber epidermis
1678 name: tuber epidermis texture
1679 def: "The texture of the tuber epidermal layer." [SGN:NM]
1680 synonym: "skin texture" EXACT []
1683 is_a: SP:0000184 ! tuber epidermis
1688 def: "The flesh layer of the tuber." [SGN:NM]
1689 xref: PO:0025038 "subterranean tuber storage parenchyma"
1690 relationship: part_of SP:0000047 ! tuber
1694 name: tuber flesh color
1695 def: "The color of the tuber flesh layer." [SGN:NM]
1698 relationship: part_of SP:0000187 ! tuber flesh
1702 name: tuber flesh pigment pattern
1703 def: "The pattern of pigmentation of the tuber flesh." [SGN:NM]
1706 is_a: SP:0000187 ! tuber flesh
1711 def: "A structure on the tuber surface that can sprout. It also has a significance in determining the processing quality." [SGN:curators]
1712 xref: PO:0025042 "A tuber axillary vegetative bud that is part of a subterranean tuber"
1713 relationship: part_of SP:0000047 ! tuber
1717 name: tuber eye depth
1718 def: "The depth of the tuber eye." [SGN:curators]
1721 relationship: part_of SP:0000190 ! tuber eye
1725 name: shoot phenotype
1726 def: "Phenotype measured using part of the sporophyte, which is composed of the stems and leaves, and includes shoot apical meristems." [SGN:curators]
1727 synonym: "vine phenotype" EXACT []
1729 is_a: SP:0001000 ! Solanaceae phenotype ontology
1734 def: "The axial system of plants that bears leaves and buds." [APWeb:Glossary]
1737 relationship: part_of SP:0000192 ! shoot phenotype
1742 def: "Erect plant growth habit." [PVP:3]
1743 synonym: "upright" EXACT []
1745 is_a: SP:0000128 ! plant habit index
1750 def: "Semi erect plant growth habit." [PVP:5]
1751 is_a: SP:0000128 ! plant habit index
1756 def: "Spreading plant growth habit." [PVP:7]
1757 synonym: "horizontal" RELATED []
1759 is_a: SP:0000128 ! plant habit index
1763 name: post harvest quality
1764 def: "After-harvest quality." [SGN:NM]
1765 is_a: SP:0001000 ! Solanaceae phenotype ontology
1770 def: "The total yield of the harvest." [SGN:NM]
1771 is_a: SP:0000197 ! post harvest quality
1775 name: tuber epidermis pigment pattern
1776 def: "The pattern of the tuber pigmentation." [SGN:NM]
1779 is_a: SP:0000184 ! tuber epidermis
1783 name: tuber morphology
1784 def: "The morphological characteristics of the tuber." [SGN:NM]
1786 relationship: part_of SP:0000047 ! tuber
1791 def: "The shape of the tuber." [SGN:NM]
1794 is_a: SP:0000200 ! tuber morphology
1799 def: "The physical size of the tuber." [SGN:NM]
1802 is_a: SP:0000200 ! tuber morphology
1809 is_a: SP:0000202 ! tuber size
1816 is_a: SP:0000202 ! tuber size
1820 name: whole plant phenotype
1821 def: "A phenotype of the entire plant, including roots, shoots and leaves, at any stage of its life cycle." [SGN:AP]
1823 is_a: SP:0001000 ! Solanaceae phenotype ontology
1827 name: shoot maturity
1828 def: "An assessment of the maturity of the shoot (vine)." [SGN:curators]
1829 synonym: "potato vine maturity (Potato Cooperators: There is considerable diversity among varieties with respect to how long they grow until they naturally senesce. 95 and 120DAP were chosen so we could evaluate differences among early-maturing varieties (95DAP) and among later maturing varieties (120DAP) )." RELATED [Potato_Cooperators:WSD]
1830 synonym: "vine maturity" EXACT []
1834 is_a: SP:0000192 ! shoot phenotype
1835 is_a: SP:0000205 ! whole plant phenotype
1839 name: early shoot maturity
1840 def: "An assesment of the shoot at an early stage of maturity." [SGN:curators]
1841 synonym: "Potato: 95 days after pollination (95DAP)" RELATED [POtato_Cooperators:WSD]
1846 name: mid shoot maturity
1847 def: "An assesment of the shoot at a mid stage of maturity." [SGN:curators]
1852 name: late shoot maturity
1853 def: "An assesment of the shoot at a late stage of maturity." [SGN:curators]
1854 synonym: "Potato: 120 days after pollination (120DAP)" RELATED [Potato_Cooperators:WSD]
1859 name: shoot maturity 120 DAP
1860 def: "Assessment of the shoot maturity 120 days after pollination (DAP)." [potato_cooperators:WDJ]
1861 synonym: "potato vine maturity 120 DAP" RELATED []
1865 is_a: SP:0000206 ! shoot maturity
1866 created_by: naamamenda
1867 creation_date: 2010-05-14T03:02:56Z
1871 name: shoot maturity 95DAP
1872 def: "Assessment of the shoot maturity 95 days after pollination (DAP)." [potato_cooperators:WDJ]
1873 synonym: "potato vine maturity 95 DAP" RELATED []
1877 is_a: SP:0000206 ! shoot maturity
1878 created_by: naamamenda
1879 creation_date: 2010-05-14T02:59:49Z
1883 name: tuber appearance
1884 def: "The overall appearance of the tuber. A 1-9 scale is used, with 1 the lowest score (\"very poor\") and 9 the highest (excellent)." [NE:1014]
1886 is_a: SP:0000200 ! tuber morphology
1887 created_by: naamamenda
1888 creation_date: 2010-05-14T02:53:14Z
1895 is_a: SP:0000202 ! tuber size
1896 created_by: naamamenda
1897 creation_date: 2010-05-14T02:51:40Z
1902 def: "Sucrose content in mg/g fresh weight." [SGN:NM]
1903 is_a: SP:0000385 ! sugars
1905 creation_date: 2010-05-14T03:59:01Z
1910 def: "Glucose content in mg/g fresh weight." [SGN:NM]
1911 is_a: SP:0000385 ! sugars
1913 creation_date: 2010-05-14T04:02:11Z
1918 def: "The mass of the tuber." [SGN:NM]
1919 synonym: "tuber weight" RELATED []
1922 relationship: part_of SP:0000047 ! tuber
1924 creation_date: 2010-05-18T11:03:02Z
1928 name: specific gravity
1929 def: "Weight in air / (weight in air -weight in water)." [potato_cooperators:WDJ]
1931 relationship: part_of SP:0000080 ! fruit mass
1932 relationship: part_of SP:0000216 ! tuber mass
1934 creation_date: 2010-05-18T11:49:44Z
1938 name: specific gravity at harvest
1939 def: "Weight in air / (weight in air -weight in water) measured at the time of harvest." [potato_cooperators:WDJ]
1941 is_a: SP:0000217 ! specific gravity
1943 creation_date: 2010-05-18T11:54:44Z
1947 name: specific gravity at storage
1948 def: "Weight in air / (weight in air -weight in water) measured at storage." [potato_cooperators:WDJ]
1950 is_a: SP:0000197 ! post harvest quality
1951 is_a: SP:0000217 ! specific gravity
1953 creation_date: 2010-05-18T11:54:44Z
1957 name: heat sprout rating
1958 def: "A scale to measure the propensity of tubers to sprout in the soil under high temperatures." [potato_cooperators:DSD]
1959 is_a: SP:0000197 ! post harvest quality
1961 creation_date: 2010-05-18T12:37:10Z
1965 name: processing quality
1966 def: "Quality of processed plant product, typically used by the food industry." [SGN:NM]
1967 is_a: SP:0001000 ! Solanaceae phenotype ontology
1969 creation_date: 2010-05-18T12:44:57Z
1974 def: "The color of a fried chip." [SGN:NM]
1977 is_a: SP:0000221 ! processing quality
1978 relationship: part_of SP:0000188 ! tuber flesh color
1980 creation_date: 2010-05-18T12:46:26Z
1984 name: Qualitative color
1985 def: "An estimate for the chip color. Scale is 1-5 with 1 being a light colored chip." [potato_cooperators:DSD]
1988 is_a: SP:0000222 ! chip color
1990 creation_date: 2010-05-18T12:47:53Z
1994 name: Quantitative color
1995 def: "A measurement of the chip color with a colorimeter at a specific wavelength." [potato_cooperators:DSD]
1998 is_a: SP:0000222 ! chip color
2000 creation_date: 2010-05-18T12:47:53Z
2004 name: tuber cross section
2006 is_a: SP:0000200 ! tuber morphology
2008 creation_date: 2010-05-19T11:59:39Z
2012 name: tuber epidermis set depth
2013 synonym: "tuber skin set depth " RELATED []
2016 is_a: SP:0000184 ! tuber epidermis
2018 creation_date: 2010-05-19T12:04:16Z
2022 name: tuber epidermis texture russet
2024 is_a: SP:0000186 ! tuber epidermis texture
2026 creation_date: 2010-05-24T02:24:59Z
2030 name: yellow flower color
2034 is_a: SP:0000009 ! flower color
2036 creation_date: 2010-05-20T02:33:53Z
2041 synonym: "TO:0000370" RELATED []
2045 is_a: SP:0000042 ! leaf size
2047 creation_date: 2010-05-22T01:59:28Z
2051 name: compound inflorescence
2055 is_a: SP:0000071 ! inflorescence structure
2057 creation_date: 2010-05-22T02:08:21Z
2061 name: shoot maturity very early
2062 def: "Vine 100% dead" [potato_cooperators:1]
2063 is_a: SP:0000210 ! shoot maturity 120 DAP
2064 is_a: SP:0000211 ! shoot maturity 95DAP
2066 creation_date: 2010-05-25T01:30:26Z
2070 name: shoot maturity early
2071 def: "Vine starting to senesce (yellowing evident)." [potato_cooperators:4]
2072 is_a: SP:0000210 ! shoot maturity 120 DAP
2073 is_a: SP:0000211 ! shoot maturity 95DAP
2075 creation_date: 2010-05-25T01:29:01Z
2079 name: tuber thickness
2083 is_a: SP:0000202 ! tuber size
2085 creation_date: 2010-05-19T01:14:50Z
2089 name: simple inflorescence
2093 is_a: SP:0000071 ! inflorescence structure
2095 creation_date: 2010-05-22T02:08:21Z
2100 is_a: SP:0000128 ! plant habit index
2102 creation_date: 2010-05-24T12:11:36Z
2107 is_a: SP:0000003 ! plant habit
2109 creation_date: 2010-05-24T12:13:17Z
2114 is_a: SP:0000236 ! plant canopy
2116 creation_date: 2010-05-24T12:13:59Z
2121 is_a: SP:0000236 ! plant canopy
2123 creation_date: 2010-05-24T12:13:59Z
2128 is_a: SP:0000236 ! plant canopy
2130 creation_date: 2010-05-24T12:13:59Z
2134 name: tuber epidermis texture netted
2135 def: "Netted skin texture." [NE1014:5]
2138 is_a: SP:0000186 ! tuber epidermis texture
2140 creation_date: 2010-05-24T02:24:59Z
2144 name: tuber epidermis texture smooth
2145 def: "Smooth skin texture." [NE1014:8]
2148 is_a: SP:0000186 ! tuber epidermis texture
2150 creation_date: 2010-05-24T02:24:59Z
2154 name: tuber epidermis texture slight net
2155 def: "Slight net skin texture." [NE1014:6]
2158 is_a: SP:0000240 ! tuber epidermis texture netted
2160 creation_date: 2010-05-24T02:25:04Z
2164 name: partial russet
2165 def: "Partial russet skin texture." [NE1014:1]
2167 is_a: SP:0000227 ! tuber epidermis texture russet
2169 creation_date: 2010-05-24T02:27:57Z
2174 def: "Heavy russet skin texture." [NE1014:2]
2176 is_a: SP:0000227 ! tuber epidermis texture russet
2178 creation_date: 2010-05-24T02:27:57Z
2182 name: moderate russet
2183 def: "Moderate russet skin texture." [NE1014:3]
2185 is_a: SP:0000227 ! tuber epidermis texture russet
2187 creation_date: 2010-05-24T02:27:57Z
2192 def: "Light russet skin texture." [NE1014:4]
2194 is_a: SP:0000227 ! tuber epidermis texture russet
2196 creation_date: 2010-05-24T02:27:57Z
2200 name: tuber epidermis texture moderately smooth
2201 def: "Moderately smooth skin texture." [NE1014:7]
2204 is_a: SP:0000241 ! tuber epidermis texture smooth
2206 creation_date: 2010-05-24T02:46:16Z
2210 name: tuber epidermis texture very smooth
2211 def: "Very smooth skin texture." [NE1014:9]
2214 is_a: SP:0000241 ! tuber epidermis texture smooth
2216 creation_date: 2010-05-24T02:46:16Z
2220 name: tuber cross section vary flat
2223 is_a: SP:0000225 ! tuber cross section
2225 creation_date: 2010-05-24T03:10:05Z
2229 name: tuber cross section flat
2232 is_a: SP:0000225 ! tuber cross section
2234 creation_date: 2010-05-24T03:10:05Z
2238 name: tuber cross section intermediate/oval
2241 is_a: SP:0000225 ! tuber cross section
2243 creation_date: 2010-05-24T03:10:05Z
2247 name: tuber cross section mostly round
2250 is_a: SP:0000225 ! tuber cross section
2252 creation_date: 2010-05-24T03:10:05Z
2256 name: tuber cross section round
2259 is_a: SP:0000225 ! tuber cross section
2261 creation_date: 2010-05-24T03:10:05Z
2265 name: tuber cross section very round
2268 is_a: SP:0000225 ! tuber cross section
2270 creation_date: 2010-05-24T03:10:05Z
2274 name: skin set depth very poor
2277 is_a: SP:0000226 ! tuber epidermis set depth
2279 creation_date: 2010-05-24T03:14:57Z
2283 name: skin set depth poor
2286 is_a: SP:0000226 ! tuber epidermis set depth
2288 creation_date: 2010-05-24T03:14:57Z
2292 name: skin set depth fair
2295 is_a: SP:0000226 ! tuber epidermis set depth
2297 creation_date: 2010-05-24T03:14:57Z
2301 name: skin set depth good
2304 is_a: SP:0000226 ! tuber epidermis set depth
2306 creation_date: 2010-05-24T03:14:57Z
2310 name: skin set depth excellent
2313 is_a: SP:0000226 ! tuber epidermis set depth
2315 creation_date: 2010-05-24T03:14:57Z
2319 name: tuber size small
2320 def: "Small tuber size." [NE1014:1]
2323 is_a: SP:0000322 ! tuber size index
2325 creation_date: 2010-05-25T12:38:06Z
2329 name: tuber size small-medium
2330 def: "Small-medium tuber size." [NE1014:3]
2333 is_a: SP:0000322 ! tuber size index
2335 creation_date: 2010-05-25T12:38:06Z
2339 name: tuber size medium
2340 def: "Medium tuber size." [NE1014:5]
2342 is_a: SP:0000322 ! tuber size index
2344 creation_date: 2010-05-25T12:38:06Z
2348 name: tuber size medium-large
2349 def: "Medium-large tuber size." [NE1014:7]
2352 is_a: SP:0000322 ! tuber size index
2354 creation_date: 2010-05-25T12:38:06Z
2358 name: tuber size large
2359 def: "Large tuber size." [NE1014:9]
2362 is_a: SP:0000322 ! tuber size index
2364 creation_date: 2010-05-25T12:38:06Z
2368 name: tuber appearance very poor
2369 def: "Very poor tuber appearance." [NE1014:1]
2371 is_a: SP:0000212 ! tuber appearance
2373 creation_date: 2010-05-25T01:09:49Z
2377 name: tuber appearance poor
2378 def: "Poor tuber appearance." [NE1014:3]
2380 is_a: SP:0000212 ! tuber appearance
2382 creation_date: 2010-05-25T01:10:08Z
2386 name: tuber appearance fair
2387 def: "Fair tuber appearance." [NE1014:5]
2389 is_a: SP:0000212 ! tuber appearance
2391 creation_date: 2010-05-25T01:10:27Z
2395 name: tuber appearance good
2396 def: "Good tuber appearance." [NE1014:7]
2398 is_a: SP:0000212 ! tuber appearance
2400 creation_date: 2010-05-25T01:10:43Z
2404 name: tuber appearance excellent
2407 is_a: SP:0000212 ! tuber appearance
2409 creation_date: 2010-05-25T01:10:59Z
2413 name: shoot maturity mid-season
2414 def: "Green vine, done flowering." [potato_cooperators:6]
2415 is_a: SP:0000210 ! shoot maturity 120 DAP
2416 is_a: SP:0000211 ! shoot maturity 95DAP
2418 creation_date: 2010-05-25T01:31:19Z
2422 name: shoot maturity late
2423 def: "Green Vine; Some flowers yet in bloom." [potato_cooperators:7]
2424 is_a: SP:0000210 ! shoot maturity 120 DAP
2425 is_a: SP:0000211 ! shoot maturity 95DAP
2427 creation_date: 2010-05-25T01:31:45Z
2431 name: shoot maturity very late
2432 def: "Full bloom with buds evident as well." [potato_cooperators:9]
2433 is_a: SP:0000210 ! shoot maturity 120 DAP
2434 is_a: SP:0000211 ! shoot maturity 95DAP
2436 creation_date: 2010-05-25T01:32:07Z
2440 name: tuber skin color white
2444 is_a: SP:0000185 ! tuber epidermis color
2446 creation_date: 2010-05-25T01:45:53Z
2450 name: tuber skin color light yellow
2454 is_a: SP:0000185 ! tuber epidermis color
2456 creation_date: 2010-05-25T01:46:14Z
2460 name: tuber skin color yellow
2464 is_a: SP:0000185 ! tuber epidermis color
2466 creation_date: 2010-05-25T01:47:11Z
2470 name: tuber skin color pale yellow
2471 synonym: "buff" RELATED []
2475 is_a: SP:0000185 ! tuber epidermis color
2477 creation_date: 2010-05-25T03:06:13Z
2481 name: tuber skin color pale brown
2482 synonym: "tan" RELATED []
2486 is_a: SP:0000185 ! tuber epidermis color
2488 creation_date: 2010-05-25T03:07:50Z
2492 name: tuber skin color brown
2496 is_a: SP:0000185 ! tuber epidermis color
2498 creation_date: 2010-05-25T03:09:11Z
2502 name: tuber skin color pink
2506 is_a: SP:0000185 ! tuber epidermis color
2508 creation_date: 2010-05-25T03:09:57Z
2512 name: tuber skin color red
2516 is_a: SP:0000185 ! tuber epidermis color
2518 creation_date: 2010-05-25T03:10:27Z
2522 name: tuber skin color maroon
2523 synonym: "purplish red " RELATED []
2527 is_a: SP:0000185 ! tuber epidermis color
2529 creation_date: 2010-05-25T03:10:54Z
2533 name: tuber skin color purple
2537 is_a: SP:0000185 ! tuber epidermis color
2539 creation_date: 2010-05-25T03:13:00Z
2543 name: tuber skin color dark purple
2547 is_a: SP:0000185 ! tuber epidermis color
2549 creation_date: 2010-05-25T03:14:06Z
2553 name: tuber thickness round
2556 is_a: SP:0000233 ! tuber thickness
2558 creation_date: 2010-05-25T03:17:39Z
2562 name: tuber thickness medium
2565 is_a: SP:0000233 ! tuber thickness
2567 creation_date: 2010-05-25T03:19:04Z
2571 name: tuber thickness slightly flattened
2574 is_a: SP:0000233 ! tuber thickness
2576 creation_date: 2010-05-25T03:19:19Z
2580 name: tuber thickness flattened
2583 is_a: SP:0000233 ! tuber thickness
2585 creation_date: 2010-05-25T03:19:41Z
2589 name: tuber flesh color brown
2593 is_a: SP:0000188 ! tuber flesh color
2595 creation_date: 2010-05-25T03:22:15Z
2599 name: tuber flesh color light yellow
2604 is_a: SP:0000188 ! tuber flesh color
2606 creation_date: 2010-05-25T11:01:55Z
2610 name: tuber flesh color maroon
2611 synonym: "purplish red " RELATED []
2615 is_a: SP:0000188 ! tuber flesh color
2617 creation_date: 2010-05-25T11:02:30Z
2621 name: tuber flesh color pale brown
2622 synonym: "tan" RELATED []
2626 is_a: SP:0000188 ! tuber flesh color
2628 creation_date: 2010-05-25T11:03:05Z
2632 name: tuber flesh color dark purple
2636 is_a: SP:0000188 ! tuber flesh color
2638 creation_date: 2010-05-25T11:03:46Z
2642 name: tuber flesh color purple
2647 is_a: SP:0000188 ! tuber flesh color
2649 creation_date: 2010-05-25T11:05:33Z
2653 name: tuber flesh color pale yellow
2654 synonym: "buff" RELATED []
2659 is_a: SP:0000188 ! tuber flesh color
2661 creation_date: 2010-05-25T11:06:29Z
2665 name: tuber flesh color pink
2670 is_a: SP:0000188 ! tuber flesh color
2672 creation_date: 2010-05-25T11:07:00Z
2676 name: tuber flesh color red
2681 is_a: SP:0000188 ! tuber flesh color
2683 creation_date: 2010-05-25T11:07:47Z
2687 name: tuber flesh color white
2692 is_a: SP:0000188 ! tuber flesh color
2694 creation_date: 2010-05-25T11:08:41Z
2698 name: tuber flesh color yellow
2703 is_a: SP:0000188 ! tuber flesh color
2705 creation_date: 2010-05-25T11:09:32Z
2709 name: tuber eye depth protruding
2710 def: "Protruding tuber eyes." [PVP:1]
2713 is_a: SP:0000191 ! tuber eye depth
2715 creation_date: 2010-05-25T11:44:29Z
2719 name: tuber eye depth shallow
2720 def: "Shallow tuber eyes." [PVP:3]
2723 is_a: SP:0000191 ! tuber eye depth
2725 creation_date: 2010-05-26T10:36:18Z
2729 name: tuber eye depth intermediate
2730 def: "Intermediate tuber eye depth." [PVP:5]
2733 is_a: SP:0000191 ! tuber eye depth
2735 creation_date: 2010-05-26T10:37:14Z
2739 name: tuber eye depth deep
2740 def: "Deep tuber eyes." [PVP:7]
2743 is_a: SP:0000191 ! tuber eye depth
2745 creation_date: 2010-05-26T10:38:50Z
2749 name: tuber eye depth very deep
2750 def: "Very deep tuber eyes." [PVP:9]
2753 is_a: SP:0000191 ! tuber eye depth
2755 creation_date: 2010-05-26T10:39:15Z
2759 name: heat sprout rating swollen eyes
2760 xref: potato_cooperators:2
2761 is_a: SP:0000220 ! heat sprout rating
2763 creation_date: 2010-05-26T10:52:46Z
2767 name: heat sprout rating sprouts caliber 1/4 inch
2768 xref: potato_cooperators:3
2769 is_a: SP:0000220 ! heat sprout rating
2771 creation_date: 2010-05-26T10:53:40Z
2775 name: heat sprout rating sprouts caliber 1/2 inch
2776 xref: potato_cooperators:4
2777 is_a: SP:0000220 ! heat sprout rating
2779 creation_date: 2010-05-26T10:54:11Z
2783 name: heat sprout rating sprouts caliber 1 inch
2784 xref: potato_cooperators:5
2785 is_a: SP:0000220 ! heat sprout rating
2787 creation_date: 2010-05-26T10:54:25Z
2791 name: heat sprout rating sprouts caliber 2 inches
2792 xref: potato_cooperators:6
2793 is_a: SP:0000220 ! heat sprout rating
2795 creation_date: 2010-05-26T10:54:42Z
2799 name: heat sprout rating sprouts caliber 3 inches
2800 xref: potato_cooperators:7
2801 is_a: SP:0000220 ! heat sprout rating
2803 creation_date: 2010-05-26T10:55:00Z
2807 name: heat sprout rating chain tubers
2808 xref: potato_cooperators:9
2809 is_a: SP:0000220 ! heat sprout rating
2811 creation_date: 2010-05-26T10:55:25Z
2815 name: tuber epidermis pigment pattern eyes
2816 def: "Tuber skin pigment pattern has eyes. See potato cooperators guide Figure 13." [potato_cooperators:fig13]
2818 xref: potato_cooperators:1
2819 is_a: SP:0000199 ! tuber epidermis pigment pattern
2821 creation_date: 2010-05-26T10:57:25Z
2825 name: tuber epidermis pigment pattern eyebrows
2826 def: "Tuber skin pigment pattern has eyebrows. See potato cooperators guide Figure 13." [potato_cooperators:fig13]
2828 xref: potato_cooperators:2
2829 is_a: SP:0000199 ! tuber epidermis pigment pattern
2831 creation_date: 2010-05-26T10:59:31Z
2835 name: tuber epidermis pigment pattern splashed
2836 def: "Tuber skin pigment pattern is splashed. See potato cooperators guide Figure 13." [potato_cooperators:fig13]
2838 xref: potato_cooperators:3
2839 is_a: SP:0000199 ! tuber epidermis pigment pattern
2841 creation_date: 2010-05-26T11:06:50Z
2845 name: tuber epidermis pigment pattern scattered
2846 def: "Tuber skin pigment pattern is scattered See potato cooperators guide Figure 13." [potato_cooperators:fig13]
2848 xref: potato_cooperators:4
2849 is_a: SP:0000199 ! tuber epidermis pigment pattern
2851 creation_date: 2010-05-26T11:08:01Z
2855 name: tuber epidermis pigment pattern spectacled
2856 def: "Tuber skin pigment pattern is scattered See potato cooperators guide Figure 13." [potato_cooperators:fig13]
2858 xref: potato_cooperators:5
2859 is_a: SP:0000199 ! tuber epidermis pigment pattern
2861 creation_date: 2010-05-26T11:08:25Z
2865 name: tuber epidermis pigment pattern stippled
2866 def: "Tuber skin pigment pattern is stippled See potato cooperators guide Figure 13." [potato_cooperators:fig13]
2868 xref: potato_cooperators:6
2869 is_a: SP:0000199 ! tuber epidermis pigment pattern
2871 creation_date: 2010-05-26T11:10:42Z
2875 name: tuber shape compressed
2876 def: "Compressed shape. See potato cooperators guide, Figure 14." [potato_cooperators:fig14]
2879 xref: potato_cooperators:1
2880 is_a: SP:0000201 ! tuber shape
2882 creation_date: 2010-05-26T12:18:26Z
2886 name: tuber shape round
2887 def: "Round shape. See potato cooperators guide, Figure 14." [potato_cooperators:fig14]
2890 xref: potato_cooperators:2
2891 is_a: SP:0000201 ! tuber shape
2893 creation_date: 2010-05-26T12:23:21Z
2897 name: tuber shape oval
2898 def: "Oval shape. See potato cooperators guide, Figure 14." [potato_cooperators:fig14]
2899 synonym: "ovate" RELATED []
2902 xref: potato_cooperators:3
2903 is_a: SP:0000201 ! tuber shape
2905 creation_date: 2010-05-26T12:25:26Z
2909 name: tuber shape long
2910 def: "Long tuber shape. See potato cooperators guide, Figure 14." [potato_cooperators:fig14]
2912 xref: potato_cooperators:5
2913 is_a: SP:0000201 ! tuber shape
2915 creation_date: 2010-05-26T12:26:01Z
2919 name: tuber shape oblong
2920 def: "Elongated tuber shape. See potato cooperators guide, Figure 14." [potato_cooperators:fig14]
2923 xref: potato_cooperators:4
2924 is_a: SP:0000201 ! tuber shape
2926 creation_date: 2010-05-26T12:26:59Z
2930 name: tuber size index
2932 is_a: SP:0000202 ! tuber size
2934 creation_date: 2010-05-26T03:32:52Z
2938 name: heat sprout rating none
2939 xref: potato_cooperators:1
2940 is_a: SP:0000220 ! heat sprout rating
2942 creation_date: 2010-05-28T02:26:47Z
2946 name: heat sprout rating new top growth
2947 xref: potato_cooperators:8
2948 is_a: SP:0000220 ! heat sprout rating
2950 creation_date: 2010-05-28T02:30:09Z
2954 name: shoot maturity very early 2
2955 def: "Between very early and early." [potato_cooperators:2]
2956 is_a: SP:0000211 ! shoot maturity 95DAP
2957 is_a: SP:0000231 ! shoot maturity very early
2959 creation_date: 2010-06-02T01:34:00Z
2963 name: shoot maturity very early 3
2964 def: "Between very early and early." [potato_cooperators:3]
2965 is_a: SP:0000211 ! shoot maturity 95DAP
2966 is_a: SP:0000231 ! shoot maturity very early
2968 creation_date: 2010-06-02T01:35:11Z
2972 name: shoot maturity mid-season 5
2973 def: "Between early and mid-season." [potato_cooperators:5]
2974 is_a: SP:0000211 ! shoot maturity 95DAP
2975 is_a: SP:0000270 ! shoot maturity mid-season
2977 creation_date: 2010-06-02T01:41:17Z
2981 name: shoot maturity late 8
2982 def: "Between late and very late." [potato_cooperators:8]
2983 is_a: SP:0000211 ! shoot maturity 95DAP
2984 is_a: SP:0000271 ! shoot maturity late
2986 creation_date: 2010-06-02T01:41:57Z
2991 def: "Erect plant growth habit. close to 90 degrees." [PVP:1]
2992 synonym: "upright" EXACT []
2994 is_a: SP:0000194 ! erect
2996 creation_date: 2010-06-02T01:44:31Z
3001 def: "Erect plant growth habit. Between 90-45 degrees" [PVP:2]
3002 synonym: "upright" EXACT []
3004 is_a: SP:0000194 ! erect
3006 creation_date: 2010-06-02T01:45:17Z
3011 def: "Semi-erect plant growth habit. 45 degrees." [PVP:4]
3012 synonym: "upright" EXACT []
3014 is_a: SP:0000195 ! semi erect
3016 creation_date: 2010-06-02T01:47:35Z
3021 def: "Spreading plant growth habit. Less than 30 degrees" [PVP:6]
3022 synonym: "upright" EXACT []
3024 is_a: SP:0000196 ! spreading
3026 creation_date: 2010-06-02T01:49:13Z
3031 def: "Spreading plant growth habit. Less than 15 degrees" [PVP:8]
3032 synonym: "upright" EXACT []
3034 is_a: SP:0000196 ! spreading
3036 creation_date: 2010-06-02T01:51:05Z
3041 def: "Spreading plant growth habit. Zero degrees." [PVP:9]
3042 synonym: "upright" EXACT []
3044 is_a: SP:0000196 ! spreading
3046 creation_date: 2010-06-02T01:51:45Z
3050 name: tuber size small 2
3051 def: "Small to small-medium tuber size." [NE1014:2]
3054 is_a: SP:0000260 ! tuber size small
3056 creation_date: 2010-06-02T11:13:04Z
3060 name: tuber size small 4
3061 def: "Small-medium to medium tuber size." [NE1014:4]
3064 is_a: SP:0000261 ! tuber size small-medium
3066 creation_date: 2010-06-02T11:13:58Z
3070 name: tuber size medium 6
3071 def: "Medium to medium-large tuber size." [NE1014:6]
3073 is_a: SP:0000262 ! tuber size medium
3075 creation_date: 2010-06-02T11:14:57Z
3079 name: tuber size medium-large 8
3080 def: "Medium-large to large tuber size." [NE1014:8]
3083 is_a: SP:0000263 ! tuber size medium-large
3085 creation_date: 2010-06-02T11:16:02Z
3089 name: tuber appearance very poor 2
3090 def: "Very poor to poor tuber appearance." [NE1014:2]
3092 is_a: SP:0000265 ! tuber appearance very poor
3094 creation_date: 2010-06-04T02:39:11Z
3098 name: tuber appearance good 8
3099 def: "Good to excellent tuber appearance." [NE1014:8]
3101 is_a: SP:0000268 ! tuber appearance good
3103 creation_date: 2010-06-04T02:40:33Z
3107 name: tuber appearance poor 4
3108 def: "Poor to fair tuber appearance." [NE1014:4]
3110 is_a: SP:0000266 ! tuber appearance poor
3112 creation_date: 2010-06-04T02:40:54Z
3116 name: tuber appearance fair 6
3117 def: "Fair to good tuber appearance." [NE1014:6]
3119 is_a: SP:0000267 ! tuber appearance fair
3121 creation_date: 2010-06-04T02:42:42Z
3127 relationship: part_of SP:0000001 ! seedling
3129 creation_date: 2010-07-15T03:19:16Z
3133 name: hypocotyl anthocyanin content
3134 is_a: SP:0000016 ! anthocyanin content
3135 relationship: part_of SP:0000343 ! hypocotyl
3137 creation_date: 2010-07-15T03:25:42Z
3141 name: titratable acids
3142 def: "Grams of citric acid per 100ml. Method for measuring is NaOH titration." [SolCAP:DF]
3143 is_a: SP:0000166 ! citric acid
3145 creation_date: 2010-07-15T03:39:19Z
3149 name: fruit color uniformity external
3150 def: "The proportion of the 2D area of the red color epicarp out of the total epicarp area visible from a top view of the proximal fruit end." [SGN:EVDK]
3151 synonym: "epicarp color uniformity" EXACT [SGN:NM]
3152 is_a: SP:0000094 ! fruit color uniformity
3153 is_a: SP:0000097 ! epicarp color
3155 creation_date: 2010-07-15T03:45:08Z
3159 name: fruit color uniformity internal
3160 is_a: SP:0000094 ! fruit color uniformity
3161 is_a: SP:0000099 ! endocarp color
3163 creation_date: 2010-07-15T03:47:35Z
3167 name: internal color uniformity cross section
3168 synonym: "internal color uniformity latitudinal cross section" RELATED [SGN:NM]
3169 is_a: SP:0000347 ! fruit color uniformity internal
3171 creation_date: 2010-07-15T03:52:29Z
3175 name: internal color uniformity longitudinal
3176 is_a: SP:0000347 ! fruit color uniformity internal
3178 creation_date: 2010-07-15T03:52:29Z
3182 name: fruit color uniformity cross section percent red
3183 def: "Percentage of surface area with hue angle between 0-50 on a 0-360 scale." [SGN:DF]
3184 is_a: SP:0000348 ! internal color uniformity cross section
3186 creation_date: 2010-07-15T04:00:40Z
3190 name: fruit color uniformity cross section percent yellow
3191 def: "Percentage of surface area with hue angle between 70-100 on a 0-360 scale." [SGN:DF]
3192 is_a: SP:0000348 ! internal color uniformity cross section
3194 creation_date: 2010-07-15T04:00:40Z
3198 name: Cross section average RGB red
3199 def: "Measurement of the color red of the cross section on RGB scale." [SGN:DF]
3200 is_a: SP:0000353 ! endocarp cross section color
3202 creation_date: 2010-07-15T04:07:07Z
3206 name: endocarp cross section color
3207 is_a: SP:0000099 ! endocarp color
3209 creation_date: 2010-07-15T04:10:25Z
3213 name: endocarp longitudinal section
3214 is_a: SP:0000099 ! endocarp color
3216 creation_date: 2010-07-15T04:10:25Z
3220 name: Cross section average RGB green
3221 def: "Measurement of the color green of the cross section on RGB scale." [SGN:DF]
3222 is_a: SP:0000353 ! endocarp cross section color
3224 creation_date: 2010-07-15T04:10:39Z
3228 name: Cross section average RGB blue
3229 def: "Measurement of the color blue of the cross section on RGB scale." [SGN:DF]
3230 is_a: SP:0000353 ! endocarp cross section color
3232 creation_date: 2010-07-15T04:10:55Z
3236 name: Cross section average L value
3237 def: "THe average L value of all the pixels in CIELab color space." [JASHS:(2008) 133(4)\:579-586]
3238 is_a: SP:0000353 ! endocarp cross section color
3240 creation_date: 2010-07-15T04:12:02Z
3244 name: Cross section average 'a' value
3245 def: "THe average 'a' value of all the pixels in CIELab color space." [JASHS:(2008) 133(4)\:579-586]
3246 is_a: SP:0000353 ! endocarp cross section color
3248 creation_date: 2010-07-15T04:16:45Z
3252 name: Cross section average 'b' value
3253 def: "THe average 'b' value of all the pixels in CIELab color space." [JASHS:(2008) 133(4)\:579-586]
3254 is_a: SP:0000353 ! endocarp cross section color
3256 creation_date: 2010-07-15T04:17:20Z
3260 name: Cross section average luminosity
3261 def: "A measure of brightness. Average luminosity of all the pixels in the cross section. Luminosity = (maxCol + minCol) * 240/(2* 255) where maxCol is the highest of the RGB values, and minCol is the lowest value per pixel." [JASHS:(2008) 133(4)\:579-586]
3262 is_a: SP:0000353 ! endocarp cross section color
3264 creation_date: 2010-07-15T04:20:01Z
3268 name: Cross section average hue
3269 def: "Hue is a measure of color in CIELab colorspace.\nFor 'a' values > 0, hue is 180/pi * cos[a / chroma].\nFor 'a' values < 0 , hues is 360 - {180/pi * acos[a / chroma] }." [JASHS:(2008) 133(4)\:579-586]
3270 is_a: SP:0000353 ! endocarp cross section color
3272 creation_date: 2010-07-15T04:23:43Z
3276 name: Cross section average chroma
3277 def: "Chroma is a measure of saturation in CIELab colorspace.\nChroma is the square root of (a^2 + b^2)." [JASHS:(2008) 133(4)\:579-586]
3278 is_a: SP:0000353 ! endocarp cross section color
3280 creation_date: 2010-07-15T04:27:15Z
3284 name: flower fasciation
3285 is_a: SP:0000008 ! flower morphology
3287 creation_date: 2010-07-19T10:27:21Z
3292 def: "The stalk of an inflorescence; that part of the inflorescence below the first flower or inflorescence branch and above the last foliage leaf/pair of foliage leaves." [PO:0009053]
3293 synonym: "inflorescence abscission layer" RELATED []
3295 is_a: SP:0000007 ! inflorescence
3297 creation_date: 2010-07-19T10:44:41Z
3301 name: fruit ripening timing
3302 is_a: SP:0000013 ! fruit ripening
3304 creation_date: 2010-07-19T11:25:30Z
3308 name: days to fruit ripening
3309 synonym: "days to fruit maturity" RELATED []
3310 is_a: SP:0000365 ! fruit ripening timing
3312 creation_date: 2010-07-19T11:26:41Z
3316 name: distal fruit end scar
3317 synonym: "blossom scar" RELATED []
3318 relationship: part_of SP:0000070 ! distal fruit end shape
3320 creation_date: 2010-07-19T11:30:20Z
3324 name: distal fruit end scar size
3325 synonym: "blossom scar size" EXACT []
3326 is_a: SP:0000367 ! distal fruit end scar
3328 creation_date: 2010-07-19T11:31:07Z
3332 name: proximal angle micro 2%
3333 is_a: SP:0000074 ! proximal fruit end angle
3335 creation_date: 2010-07-19T12:39:49Z
3339 name: proximal angle macro 20%
3340 is_a: SP:0000074 ! proximal fruit end angle
3342 creation_date: 2010-07-19T12:40:13Z
3347 relationship: part_of SP:0000037 ! fruit
3349 creation_date: 2010-07-19T01:12:38Z
3353 name: pericarp thickness
3354 synonym: "pericarp width" RELATED []
3355 relationship: part_of SP:0000371 ! pericarp
3357 creation_date: 2010-07-19T01:14:10Z
3361 name: fruit anthocyanin content
3362 is_a: SP:0000016 ! anthocyanin content
3363 is_a: SP:0000167 ! fruit metabolites
3365 creation_date: 2010-09-17T03:40:45Z
3370 relationship: part_of SP:0000001 ! seedling
3372 creation_date: 2011-01-17T11:45:36Z
3376 name: cotyledon color
3377 relationship: part_of SP:0000374 ! Cotyledon
3379 creation_date: 2011-01-17T11:47:14Z
3383 name: cotyledon number
3384 relationship: part_of SP:0000374 ! Cotyledon
3386 creation_date: 2011-01-17T11:47:14Z
3390 name: cotyledon size
3391 relationship: part_of SP:0000374 ! Cotyledon
3393 creation_date: 2011-01-17T11:47:14Z
3397 name: cotyledon morphology
3398 relationship: part_of SP:0000374 ! Cotyledon
3400 creation_date: 2011-01-17T11:47:14Z
3404 name: seed germination inside fruit
3405 def: "The seed begins germinating inside the fruit. Often associated with a delay in fruit harvesting (the fruit is too ripe), the pre- germination could also be caused by an altered fruit flesh pH or by hormonal imbalance." [LycoTILL:OD]
3406 is_a: SP:0000110 ! germination
3407 is_a: SP:0000197 ! post harvest quality
3409 creation_date: 2011-01-31T09:54:16Z
3413 name: increased fruit number
3414 is_a: SP:0000106 ! fruit number
3416 creation_date: 2011-01-31T09:59:18Z
3420 name: decreased fruit number
3421 is_a: SP:0000106 ! fruit number
3423 creation_date: 2011-01-31T09:59:18Z
3427 name: no fruit setting
3428 is_a: SP:0000106 ! fruit number
3430 creation_date: 2011-01-31T09:59:18Z
3434 name: intermediate inflorescence
3437 is_a: SP:0000071 ! inflorescence structure
3439 creation_date: 2011-09-16T02:49:09Z
3443 name: fruit height at widest position asymmetry
3444 def: "The ratio of the height at which the maximum width occurs, to the Maximum Height." [SGN:EVDK]
3445 is_a: SP:0000058 ! fruit shape eccentric
3447 creation_date: 2011-09-26T10:46:06Z
3452 is_a: SP:0000019 ! biochemical metabolites
3454 creation_date: 2012-11-01T04:06:13Z
3459 is_a: SP:0000385 ! sugars
3461 creation_date: 2012-11-01T04:07:53Z
3466 def: "sucrose measured in the field (mg/g fresh weight)." [SGN:NM]
3467 is_a: SP:0000214 ! sucrose
3469 creation_date: 2012-11-01T04:16:50Z
3473 name: storage sucrose
3474 def: "sucrose measured in storage (mg/g fresh weight)." [SGN:NM]
3475 is_a: SP:0000197 ! post harvest quality
3476 is_a: SP:0000214 ! sucrose
3478 creation_date: 2012-11-01T04:18:34Z
3483 def: "glucose measured in the field (mg/g fresh weight)" [SGN:NM]
3484 is_a: SP:0000215 ! glucose
3486 creation_date: 2012-11-01T04:19:27Z
3490 name: storage glucose
3491 def: "glucose measured in the field (mg/g fresh weight)." [SGN:NM]
3492 is_a: SP:0000197 ! post harvest quality
3493 is_a: SP:0000215 ! glucose
3495 creation_date: 2012-11-01T04:19:27Z
3499 name: potato fry color
3500 def: "potato fry color rating based on reflectance measured from light to dark." [SGN:NM]
3501 is_a: SP:0000221 ! processing quality
3503 creation_date: 2012-11-01T04:24:02Z
3507 name: tuber flesh color blue
3511 is_a: SP:0000188 ! tuber flesh color
3513 creation_date: 2012-11-02T04:02:18Z
3517 name: tuber flesh color dark-yellow to orange
3521 is_a: SP:0000188 ! tuber flesh color
3523 creation_date: 2012-11-02T04:03:23Z
3527 name: fruit solids percentage
3528 def: "Net dry weight (after 1 week in oven) divided by net fresh weight of the fruit and multiplied by 100." [SGN:EVDK]
3529 relationship: variable_of SP:0000080 ! fruit mass
3531 creation_date: 2017-02-06T15:17:20Z
3535 name: male sterility
3536 synonym: "TO:0000437" RELATED []
3540 is_a: SP:0000141 ! partial sterility
3541 is_a: SP:0000142 ! full sterility
3545 name: female sterility
3546 synonym: "TO:0000358" RELATED []
3550 is_a: SP:0000141 ! partial sterility
3551 is_a: SP:0000142 ! full sterility
3555 name: Solanaceae phenotype ontology