sgn_fixture_template.conf

   1
   2 # this file should not contain database access info.
   3 # the key/value pairs in here will be used for the sgn_fixture.conf file
   4 # to run fixture-based tests.
   5 #
   6
   7 homepage_files_dir        t/data/static_content
   8
   9 trait_ontology_db_name CO
  10 allow_observation_variable_submission_interface 1
  11
  12 default_genotyping_protocol "GBS ApeKI genotyping v4"
  13 #disable_login 0
  14
  15 vigs_db_path             __HOME__/t/data/vigstool/
  16 vigs_default_db          Nicotiana_benthamiana_v0.4.4
  17
  18 blast_path                ""
  19 blast_db_path             __HOME__/t/data/blast
  20 blast_log                 /tmp/blast.log
  21 trial_download_logfile /tmp/trial_download_log
  22
  23 cluster_shared_bindir  /usr/bin
  24 #
  25 #the shared temp directory used by cluster nodes
  26 cluster_shared_tempdir     /tmp
  27 gbs_temp_data  /tmp
  28
  29
  30 archive_path /tmp/archive_test
  31 static_datasets_path      /export/prod/tmp
  32 image_dir                 /images/image_files
  33
  34 production_server 0
  35
  36 solgs_dir /tmp/solgs/__USERNAME__
  37
  38 <Controller::Cview>
  39 cview_default_map_id 1
  40 </Controller::Cview>
  41
  42 #solyc_conversion_files
  43 cview_db_backend Cassava
  44