fix a problem with json generation; json parser did not seem to like that $file was...
[sgn.git] / system_cvterms.txt
blob150b73fae9b173eb3308733e6db05424ae3d8726
1 cv name cvterm name     definition      date    person  dbpatch #       comment
2 calendar        Fertilizer Event                                00052   
3 calendar        Genotyping Event                                00052   
4 calendar        Harvest Event                           00052   
5 calendar        Meeting Event                           00052   
6 calendar        Phenotyping Event                               00052   
7 calendar        Planning Event                          00052   
8 calendar        Planting Event                          00052   
9 calendar        Presentation Event                              00052   
10 experiment_type pedigree experiment                                     
11 experiment_type cross_experiment                                00052   
12 experiment_type field_layout                            00052   
13 experiment_type genotyping_experiment                           00052   
14 experiment_type genotyping_layout                               00052   
15 experiment_type phenotyping_experiment                          00052   
16 genotype_property       igd number                                      
17 genotype_property       infinium array                                  sgn database
18 genotype_property       snp genotyping                                  
19 geolocations_property   geolocation address                             00052   
20 geolocations_property   geolocation year                                00052   
21 list_types      accessions                                      
22 list_types      crosses                         00067   
23 list_types      dataset                         00067   
24 list_types      locations                                       
25 list_types      locus_ids                                       
26 list_types      numbers                         00067   
27 list_types      plots                                   
28 list_types      populations                             00067   
29 list_types      traits                                  
30 list_types      trials                                  
31 list_types      unigene_ids                                     
32 list_types      vector_constructs                               00049   
33 list_types      years                                   
34 local   date                                    
35 local   months after planting                                   
36 local   operator                                        
37 local   organism_sequencing_metadata                                    
38 local   sp_person_id                            00052   
39 local   time                                    
40 local   visible_to_role                         00052   
41 nd_experiment_property  cross_name                              00052   
42 nd_experiment_property  cross_type                              00052   
43 nd_experiment_property  date_of_embryo_rescue                           00066   
44 nd_experiment_property  date_of_harvest                         00066   
45 nd_experiment_property  date_of_pollination                             00066   
46 nd_experiment_property  date_of_seed_extraction                         00066   
47 nd_experiment_property  days_from_extraction_to_embryo_rescue                           00066   
48 nd_experiment_property  days_from_harvest_to_extraction                         00066   
49 nd_experiment_property  days_to_maturity                                00066   
50 nd_experiment_property  genotyping_project_name                         00052   
51 nd_experiment_property  genotyping_user_id                              00052   
52 nd_experiment_property  number_of_embryos_contaminated                                  
53 nd_experiment_property  number_of_embryos_germinated                            00066   
54 nd_experiment_property  number_of_embryos_rescued                               00066   
55 nd_experiment_property  number_of_flowers                               00052   
56 nd_experiment_property  number_of_fruits                                        
57 nd_experiment_property  number_of_nonviable_seeds                               00066   
58 nd_experiment_property  number_of_progeny                               00066   
59 nd_experiment_property  number_of_seedlings_transplanted                                        
60 nd_experiment_property  number_of_seeds                         00052   
61 nd_experiment_property  number_of_seeds_extracted                               00066   
62 nd_experiment_property  number_of_seeds_germinated                              00066   
63 nd_experiment_property  number_of_seeds_planted                         00066   
64 nd_experiment_property  number_of_viable_seeds                          00066   
65 organism_property       organism_synonym                                00052   
66 project_property        breeding_program                                00051   
67 project_property        data_agreement                                  
68 project_property        design                                  
69 project_property        genomic selection                                       
70 project_property        harvest_date                            00051   
71 project_property        marker_count                                    
72 project_property        planting_date                           00051   
73 project_property        population type                                 
74 project_property        project fertilizer date                                 
75 project_property        project first harvest date                                      sgn database
76 project_property        project harvest date                                    
77 project_property        project harvested plants                                        
78 project_property        project last harvest date                                       sgn database
79 project_property        project location                                        
80 project_property        project planting date                                   
81 project_property        project sowing date                                     sgn database
82 project_property        project sown plants                                     
83 project_property        project transplanting date                                      sgn database
84 project_property        project year                                    
85 project_property        project_has_plant_entries                               00054   
86 project_property        trial_folder                                    
87 project_property        folder_for_trials       For determining if a folder appears on manage trials page       12/6/16 nm529   00071   
88 project_property        folder_for_crosses      For determining if a folder appears on manage crosses page      12/6/16 nm529   00071   
89 project_relationship    breeding_program_trial_relationship                             00051   
90 project_type    Advanced Yeld Trials                            00052   
91 project_type    Advanced Yield Trial                                    
92 project_type    Clonal Evaluation                                       
93 project_type    Preliminary Yield Trial                                 
94 project_type    Preliminary Yield Trials                                00052   
95 project_type    Regional Trials                                 
96 project_type    Seed Multiplication                                     
97 project_type    Seedling Nursery                                        
98 project_type    Uniform Yield Trial                             00052   
99 project_type    Variety Release Trial                                   
100 stock_property  block                           00052   
101 stock_property  col_number                              00052   
102 stock_property  igd_synonym                             00052   
103 stock_property  is a control                            00052   
104 stock_property  location_code                           00052   
105 stock_property  organization                            00052   
106 stock_property  plant_index_number                              00054   
107 stock_property  plot number                             00052   
108 stock_property  range                           00052   
109 stock_property  replicate                               00052   
110 stock_property  row_number                              00052   
111 stock_property  stock_synonym                           00046   
112 stock_property  T1                              00052   
113 stock_property  T2                              00052   
114 stock_property  transgenic                              00052   
115 stock_relationship      cross_relationship                              00052   
116 stock_relationship      female_parent                           00052   
117 stock_relationship      male_parent                             00052   
118 stock_relationship      member_of                               00052   
119 stock_relationship      offspring_of                            00052   
120 stock_relationship      plant_of                                00052   
121 stock_relationship      plot_of                         00052   
122 stock_relationship      tissue_sample_of                                00052   
123 stock_type      accession                               00052   
124 stock_type      backcross population                            00052   
125 stock_type      cross                           00052   
126 stock_type      f2 population                           00052   
127 stock_type      mutant population                               00052   
128 stock_type      plant                           00052   
129 stock_type      plot                            00052   
130 stock_type      population                              00052   
131 stock_type      tissue_sample                           00052   
132 stock_type      training population                             00052   
133 stock_type      vector_construct                                00052   
134 trait_property  trait_categories                                        
135 trait_property  trait_default_value                                     
136 trait_property  trait_details                                   
137 trait_property  trait_format                                    
138 trait_property  trait_maximum                                   
139 trait_property  trait_minimum                                   
140 trial_type      crossing_trial                                  
141 trial_type      genotyping_trial                                        
142 trial_type      phenotyping_trial                                       
143 project_design?                                                 suggested to move the trial design names from projectprop.value to projectprop.type_id