db/00016/AddOrganismImage.pm

   1 #!/usr/bin/env perl
   2
   3
   4 =head1 NAME
   5
   6  AddOrganismImage.pm
   7
   8 =head1 SYNOPSIS
   9
  10 mx-run ThisPackageName [options] -H hostname -D dbname -u username [-F]
  11
  12 this is a subclass of L<CXGN::Metadata::Dbpatch>
  13 see the perldoc of parent class for more details.
  14
  15 =head1 DESCRIPTION
  16
  17 Adds an image_organism table in the metadata schema.
  18
  19 This subclass uses L<Moose>. The parent class uses L<MooseX::Runnable>
  20
  21 =head1 AUTHOR
  22
  23  Naama Menda<nm249@cornell.edu>
  24
  25 =head1 COPYRIGHT & LICENSE
  26
  27 Copyright 2010 Boyce Thompson Institute for Plant Research
  28
  29 This program is free software; you can redistribute it and/or modify
  30 it under the same terms as Perl itself.
  31
  32 =cut
  33
  34 package AddOrganismImage;
  35
  36 use Moose;
  37 extends 'CXGN::Metadata::Dbpatch';
  38
  39
  40 has '+description' => ( default => <<'' );
  41 This page adds an image_organism table to the metadata schema, so that images can be associated with organisms and displayed on the organism detail page.
  42
  43 has '+prereq' => (
  44     default => sub {
  45         [],
  46     },
  47   );
  48
  49 sub patch {
  50     my $self=shift;
  51
  52     print STDOUT "Executing the patch:\n " .   $self->name . ".\n\nDescription:\n  ".  $self->description . ".\n\nExecuted by:\n " .  $self->username . " .";
  53
  54     print STDOUT "\nChecking if this db_patch was executed before or if previous db_patches have been executed.\n";
  55
  56     print STDOUT "\nExecuting the SQL commands.\n";
  57
  58     $self->dbh->do(<<EOSQL);
  59 --do your SQL here
  60 --
  61
  62 CREATE TABLE metadata.md_image_organism (
  63     md_image_organism_id serial primary key,
  64     image_id bigint references metadata.md_image not null,
  65     organism_id bigint references public.organism not null,
  66     sp_person_id bigint references sgn_people.sp_person,
  67     obsolete boolean default false
  68 );
  69
  70     GRANT UPDATE, INSERT, SELECT ON metadata.md_image_organism TO web_usr;
  71     GRANT USAGE ON metadata.md_image_organism_md_image_organism_id_seq to web_usr;
  72
  73 EOSQL
  74
  75 print "You're done!\n";
  76 }
  77
  78
  79 ####
  80 1; #
  81 ####