lib/CXGN/UploadFile.pm

   1 package CXGN::UploadFile;
   2
   3 =head1 NAME
   4
   5 CXGN::UploadFile - an object to handle uploading files
   6
   7 =head1 USAGE
   8
   9  my $uploader = CXGN::UploadFile->new();
  10  my $uploaded_file = $uploader->archive($c,$subdirectory,$tempfile,$archive_filename);
  11  my $md5 = $uploader->get_md5($uploaded_file);
  12
  13 =head1 DESCRIPTION
  14
  15
  16 =head1 AUTHORS
  17
  18  Jeremy D. Edwards (jde22@cornell.edu)
  19
  20 =cut
  21
  22 use strict;
  23 use warnings;
  24 use Moose;
  25 use Try::Tiny;
  26 use List::MoreUtils qw /any /;
  27 use File::Copy;
  28 use File::Spec::Functions;
  29 use File::Basename qw | basename dirname|;
  30 use Digest::MD5;
  31
  32 sub archive {
  33     my $self = shift;
  34     my $c = shift;
  35     my $subdirectory = shift;
  36     my $tempfile = shift;
  37     my $archive_filename = shift;
  38     my $timestamp = shift;
  39     my $archive_path = $c->config->{archive_path};
  40     my $user_id;
  41     my $user_name;
  42     my $archived_file_name;
  43     my $file_destination;
  44     my $error;
  45     if (!$c->user()) {          #user must be logged in
  46         die "You need to be logged in to archive a file.\n";
  47     }
  48     if (!any { $_ eq "curator" || $_ eq "submitter" } ($c->user()->roles)  ) {
  49         die  "You have insufficient privileges to archive a file.\n";
  50     }
  51     if (!$subdirectory || !$tempfile || !$archive_filename ) {
  52         die "File archive failed: incomplete information to archive file.\n";
  53     }
  54     $user_id = $c->user()->get_object()->get_sp_person_id();
  55     $user_name = $c->user()->get_object()->get_username();
  56     $file_destination =  catfile($archive_path, $user_id, $subdirectory,$timestamp."_".$archive_filename);
  57     try {
  58         if (!-d $archive_path) {
  59             mkdir $archive_path;
  60         }
  61         if (! -d catfile($archive_path, $user_id)) {
  62           mkdir (catfile($archive_path, $user_id));
  63         }
  64         if (! -d catfile($archive_path, $user_id, $subdirectory)) {
  65           mkdir (catfile($archive_path, $user_id, $subdirectory));
  66         }
  67         copy($tempfile,$file_destination);
  68     } catch {
  69         $error = "Error saving archived file: $file_destination\n$_";
  70     };
  71     if ($error) {
  72         die "$error\n";
  73     }
  74     return $file_destination;
  75 }
  76
  77 sub get_md5 {
  78     my $self = shift;
  79     my $file_name_and_location = shift;
  80     print STDERR $file_name_and_location;
  81
  82     open(my $F, "<", $file_name_and_location) || die "Can't open file ";
  83     binmode $F;
  84     my $md5 = Digest::MD5->new();
  85     $md5->addfile($F);
  86     close($F);
  87     return $md5;
  88 }
  89
  90 ###
  91 1;
  92 ###