lib/SGN/Controller/Phenotypes.pm

   1 package SGN::Controller::Phenotypes;
   2
   3 =head1 NAME
   4
   5 SGN::Controller::Phenotypes - Catalyst controller for pages dealing with
   6 phenotypes submission and associating them with project, experiments, and stock accessions.
   7
   8 =cut
   9
  10 use Moose;
  11 use namespace::autoclean;
  12 use YAML::Any qw/LoadFile/;
  13
  14 use URI::FromHash 'uri';
  15 use List::Compare;
  16 use File::Temp qw / tempfile /;
  17 use File::Slurp;
  18 use JSON::Any;
  19
  20 use CXGN::Chado::Stock;
  21 use SGN::View::Stock qw/stock_link stock_organisms stock_types/;
  22
  23
  24 BEGIN { extends 'Catalyst::Controller' }
  25 with 'Catalyst::Component::ApplicationAttribute';
  26
  27 has 'schema' => (
  28     is       => 'rw',
  29     isa      => 'DBIx::Class::Schema',
  30     lazy_build => 1,
  31 );
  32 sub _build_schema {
  33     shift->_app->dbic_schema( 'Bio::Chado::Schema', 'sgn_chado' )
  34 }
  35
  36 has 'default_page_size' => (
  37     is      => 'ro',
  38     default => 20,
  39 );
  40
  41 =head1 PUBLIC ACTIONS
  42
  43 =head2 submission_guidelines
  44
  45 Public path: /phenotype/submission_guide
  46
  47 Display the phenotype submission guidelines page
  48
  49 =cut
  50
  51 sub submission_guidelines :Path('/phenotype/submission_guide') Args(0) {
  52     my ($self, $c) = @_;
  53     $c->stash(template => '/phenotypes/submission_guide.mas');
  54
  55 }
  56
  57 #
  58 return 1;
  59 #